LOC118964703


Basic Information

Item Value
gene id LOC118964703
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 97960504 ~ 97962293 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005051925.1
CCACACTGCCTTAGTAAACACCAGCCCTGGGAACCCCACAGGTACCATCACACTGCCTTAGTTAACACCAGCCCTGGGAACCCCACAGGTACCACCACACTGCCTTAGTAAACACCAGCCCTGGGAACCCCACAGGTACCATCACACTGCCTTAGTAAACACCAGCCCTGGGAACCCCACAGGTACCATCACACTGCCTTAGTTAACACCAGCCCTGGGAACCCCACAGGTACCATCACACTGCCTTAGTTAACACCAGCCCTGGGAACCCCACAGGTACCATCACACTGCCTTAGTTAACACCAGCCCTGGGAACCCCACAGGTACCACCACACTGCCTTAGTAAACACCAGCCCTGGGAACCCCACAGGTACCATCACACTGCCTTAGTTAACACCAGCCCTGGGAACCCCACAGGTACCACCACACTGCCTTAGTAAACACCAGCCCTGGGAACCCCACAGGTACCACCACACTGCCTTAGTTAACACCAGCCCTGGGAACCCCACAGGTACCACCACACTGCCTTAGTAAACACCAGCTCTGGGAACCCCACAGGTACCATCACACTGCCTTAGTAAACACCAGCCCTGGGAACCCCACAGGTACCATCACACTGCCTTAGTTAACACCAGCCCTGGGAACCCCACAGGTACCATCACACTGCCTTAGTTAACACCAGTCCTGGGAACCCCACAGGTACCATCACACTGCCTTAGTTAACACCAGCCCTGGGAACCCCACAGGTACCATCACACTGCCTTAGTTAACACCAGCCCTGGGAACCCCACAGGTACCACCACACTGCCTTAGTAAACACCAGCCCTGGGAACCCCACAGGTACCACCACACTGCCTTAGTTAACACCAGCCCTGGGAACCCCACAGGTACCACCACACTGCCTTAGTTAACACCAGCCCTGGGAACCCCACAGGTACCACCACACTGCCTTAGTAAACACCAGCCCTGGGAACCCCACAGGTACCACCACACTGCCTTAGTTAACACCAGCCCTGGGAACCCCACAGGTACCACCACACTGCCTTAGTAAACACCAGCCCTGGGAACCCCACAGGTACCACCACACTGCCTTAGTTAACACCAGCCCTGGGAACCCCACAGGTACCATCACACTGCCTTAGTTAACACCAGCCCTGGGAACCCCACAGGTACCATCACACTGCCTTAGTTAACACCAGCCCTGGGAACCCCACAGGTACCACCACACTGCCTTAGTAAACACCAGCCCTGGGAACCCCACAGGTACCATCACACTGCCTTAGTTAACACCAGCCCTGGGAACCCCACAGGTACCATCACACTGCCTTAGTAAACACCAGCCCTGGGAACCCCACAGGTACCATCACACTGCCTTAGTTAACACCAGCCCTGGGAACCCCACAGGTACCATCACACTGCCTTAGTTAACACCAGCCCTGGGAACCCCACAGGTACCATCACACTGCCTTAGTAAACACCAGCCCTGGGAACCCCACAGGTACCGCCACACTGCCTTAGTTAACACCAGCCCTGGGAACCCCACAGGTACCATCACACTGCCTTAGTAAACACCAACCCTGGGAACCCCACAGGTACCATCACACTGCCTTAGTAAACACCAGCCCTGGGAACCCCACAGGTACCACCACACTGCCTTAGTAAACACCAGCCCTGGGAACCCCACAGGTACCATCACACTGCCTTAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005051925.1 True 1707 mRNA 0.56 2 97960504 97962293

Neighbor

gene id symbol gene type direction distance location
gtpbp6 gtpbp6 coding upstream 205349 97715395 ~ 97755155 (+)
LOC110524914 tomm70 coding upstream 252498 97677327 ~ 97708006 (+)
LOC110510444 NA coding upstream 391912 97290197 ~ 97568592 (+)
LOC110524865 NA coding upstream 793549 97164039 ~ 97166955 (+)
LOC110524859 inpp5d coding upstream 816821 97098550 ~ 97143683 (+)
herc2 herc2 coding downstream 35132 97997425 ~ 98248889 (+)
oca2 LOC106591054 coding downstream 314389 98276682 ~ 98442265 (+)
LOC110523047 LOC106560665 coding downstream 1099084 99061377 ~ 99101070 (+)
LOC110524867 bivm coding downstream 1197613 99159906 ~ 99178822 (+)
LOC110523045 NA coding downstream 1234047 99196283 ~ 99207807 (+)
G461179 NA non-coding upstream 12192 97946617 ~ 97948312 (+)
G461178 NA non-coding upstream 20405 97936640 ~ 97940099 (+)
G461177 NA non-coding upstream 29928 97930090 ~ 97930576 (+)
G461170 NA non-coding upstream 50413 97907940 ~ 97910091 (+)
G461171 NA non-coding upstream 51067 97908260 ~ 97909437 (+)
G461192 NA non-coding downstream 31018 97993311 ~ 97993844 (+)
G461202 NA non-coding downstream 60662 98022955 ~ 98023528 (+)
G461204 NA non-coding downstream 67518 98029811 ~ 98030237 (+)
G461208 NA non-coding downstream 80923 98043216 ~ 98045066 (+)
G461209 NA non-coding downstream 82128 98044421 ~ 98054223 (+)
G461121 jade3 other upstream 144531 97812808 ~ 97815973 (+)
G460428 NA other upstream 1037692 96922332 ~ 96922812 (+)
ryk LOC106560633 other upstream 1428450 96474920 ~ 96619822 (+)
G459843 NA other upstream 1712542 96247286 ~ 96247962 (+)
G459346 hdlbp other upstream 2253985 95696263 ~ 95706519 (+)
G461826 NA other downstream 711963 98674256 ~ 98677063 (+)
G461827 NA other downstream 712839 98675132 ~ 98675999 (+)
G461999 NA other downstream 812189 98774482 ~ 98779067 (+)
G462037 NA other downstream 870164 98832457 ~ 98834433 (+)
G462233 NA other downstream 1096590 99058883 ~ 99059354 (+)

Expression


Co-expression Network