LOC110524867 (bivm)


Basic Information

Item Value
gene id LOC110524867
gene name bivm
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 99159906 ~ 99178822 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021604825.2
ttcaatagaatatatatatatttatattctattTTCCTTTTAAGGCGAACAGCAAATTCCACTATTtaggctaatccttattgtggctagcttcacatagggTCTGACCATTCATCAAATTAGAACTGTTTTATAAATAAGGggtattttagatgatgacacctagatagatagttagctagctaactatagctactgaaacagatcatgtcgttttgctatgtttttgggggaagaacattgtttgtgtccattagctagctagcttttttataGCCAGCACCGTCCATAGCTTGGGGGAGTGTGTCTGCGGTCGTGAGGCAGCAGCCGGTGAGCGAAACAAAACTTTACCGGCATCATAGCACACGTATCagtgaatcgttgtgacatatgaaatacgagtgatagtctaatcaatgtgtaataattacataaacaatgaatgaacgtGTTGAATGATTACATGACGTGagagtcatattcaggtcctggttggtcaacaagcttatttgacgcTTCGAATAGTGTAAAACGGCGTTCCATACCAGCGAGGTAAATCAAGTGCACCCCACACAGGCAAATGGCTTGTTCTGATTGGTTAAAGAAAACCGGATGGCTGGTTAGGGGTTGATGGCCCTTCGTGAACGCCGAATATTGTGTGTAAATGATGAAGAAATAGGGTCAGTAATGTGAAATCCCTATAAATTGAACAATTTTAAACTCCcatttttattagattttttttttttttagcaaagcGTTAATTTAGAACTGTCTGAGAAAATCTTGTGGAAGATTACGGTTGAGCACCCCTAGTTACGTAATGGGTTAGTTCATCATTACTGTACAGCGGAAGGAGGAGGACGTCAATATACAACAGCGTATTTATCCCAACAGGAGAAATTCATACTATGTGGCTACCTAGTTAACTACCAAGTTAAAAATCCACGACACCATGCAAGATGACATCCCACCCCTCTAAACAGACCAACCACTTCAACTTTAAACAATTCTCTCATTCATCATCCCAGTCCTCTCTTCAATGCCTAACAGTGGGGATAGTTCAGGACCTAATGTGTCTGGGAGTCAGCCAGGCGACCAGGCTATGCCCTTGTCCCAGCGACCCCCACCccctgacagagaggatgaccaACGCGGCCTGCTGACCACTCTCACCCGGGACTCCCTGAGGACCCGGAGAGCCTCCAGCGCTGAGCTCCAGCTCCCATGGACCTGCCCTGTCACTCACTCCAGAGAGAAGTTCTACACGGTCTGCTCAGACTACGCCCTCCTCAACCAGGCTGCCTCTCTCTACCGGCTCCCCAGCACCCCCAGAGAGGTGGCCCACAGCAAGCAGGATGGCAGCGGGGCCCCATTAGTGAAGTCCAGCACTGTGGACCTGTCTCAGGGGCAGCCTGCAGGTGTAGAGGAGGCTTCAGACGAAGACTTTGACATGGAGGGGGTGTCCTGCAGCAACACCAAGCCTATCCTGGCTTGGGAGATTGATACCACTAACTTTGATGCTGTGCTAACTCGAAAGCCCAGGGCAAGCAACATAAAGAGAGTCGGTACTAAGAAGATGAAGTCTTCAGGGGGCAGTAGGAACCTGCAGGACCTTCCTCTCCACGCCTCGCAGGACGAGATCAAACAGAGGAAAGTCCTGGACCTCAGGAGATGGTACTGTATCAGCCGCCCCCAGTACAAGACGTCATGTGGGATATCTTCATTAGTTTCCTGCTGGAACTTTCTGTACAGCACACTAGGAGCAGGGAGTCTCCCACCCATCTCCCAGGAAGGGGCTCTTCAGATCCTAGGCTTCCAGCCTCCTTTCGAGGAGATTAAGTTTGGTCCCTTTACAGGCAACGCTACTCTGATGAGATGGTTCAGGCAAATCAATGACAATTTCCGTGTCCGAGGATGTTCCTATATTCTGTACAAACCCCACGGGAAACACAAGACAGCGGGAGAGACTGCTGAGGGGGCGTTGTTGAAGTTGACCCTGGGGTTAAGAGATGAAACCATGGCCTATATTTACCACTGTCAGAACCACTACTTCTGTCCTGTGGGCTTCGAGGCCACACCTTTCAAAGCAGCCAAGGCCTACAGGGGTACATTACCAACTAATGAAATGGAACACTGGATCCTGATTGGTGAACCAAGCAGGAAACACCCTGCTATTCACTGTAAAAAGTGGGCTGATATTGTTACagatctgaacacacaaaatccAGAATACCTTGATATTCGTCACACGGAGAGGGGAATTCAGTGCCGCAAAACCAAAAAGGTGGGAGGGAATCTTCACTGCATCATGGCTTTCCAGAGGGTCAACTGGCAGAAGCTAGGCCCCTGGGCCCTCAACCTGGAGAACCTGAGGCATGACCTCCACCACCAGGGGTCTGAGAGGGCCCAGGGGGGCTTAGCAGAGGTCCAGGAGGACAGGGAGAAGACCTCAGGAAAACACCAGGCTTTGGCCCGGCTAGGCCGCTCCAACAGCACAGGTACCAGTAACCAGAAGGACGTAGCTTGGaaacacctgtctaacaccacAGAGTACCGACACAGGAGCTCACCTGAGAGCGACGTTGAAGAAGATACCACAGATGACTGAGATTCAATGAGAAGGCTGTGAAATGAGTGCTGCTAAAATATACTGGTTAGTATATCAAACGTTTCTCAATCGTTTTtcaccaacaaaaaaaaagagcGAGAGACGAAAGTGTTGTTTTACCCCGTCTAGCATCATCCAGATTCCATCCAGGATTTTGCCTGATTATTGTAATGAAAAGTTAGTACAACATACAAGTTGATACACTTTAGTGTGAAAGCTACGTTTAATCGTCTAGCAATGTATAGAGGACTGCTGCTATTAATCAGAACGTCTGATAACATTGCATTTAAAAGCCATTTAAGAAATAAGAAGAATAAGAATAAAATCTATTAATTTTACACTTTTAAAGTGAGTGTGTTAGTTTGCGAATGTGACTGAAATCCAGTGACTACGGTAAGCCAAGTTTTTCTCAACTCCACGATGCACATCACATCAATGGAGTTGAGCGGAGACAACTACAACGAGTCGCTGTCGGTCGATAAACCCTTAccttgtacctatgtttgtcctctgtagcTGCCTTTCTTACTTCCTTAccttgtacctatgtttgtcctctgtagcTGCCTTTCTTACTTCCTTAccttgtacctatgtttgtcctctgtagcTGCCTTTCTTACTTCCTTAccttgtacctatgtttgtcctctgtagcTGCCTTTCTTACTTCCTTAccttgtacctatgtttgtcctctgtagcTGCCTTTCTTACTTCCTTAccttgtacctatgtttgtcctctgtagcTGCCTTTCTTACTTCCTTAccttgtacctatgtttgtcctctgtagcTGCCTTTCTTAATTCCTTAccttgtacctatgtttgtcctctgtagcTGCCTTTCTTACTTCCTTAccttgtacctatgtttgtcctctgtagcTGCCTTTCTTAATTCCTTAccttgtacctatgtttgtcctctgtagcTGCCTTTCTTACTTCCTTAccttgtacctatgtttgtcctctgtagcTGCCTTTCTTAATTCCTTAccttgtacctatgtttgtcctctgtagcTGCCTTTCTTAATTCCTTAccttgtacctatgtttgtcctctgtagcTGCCTTTCTTAATTCCTTAccttgtacctatgtttgtcctctgtagcTGCCTTTCTTAATTCCTTAccttgtacctatgtttgtcctctgtagcTGTCTTTCTTAATTCCTTAccttgtacctatgtttgtcctctgtagcTGTTTGTAGCTGTGTgcctttctttgtttgctgaTATCCATACTTTTTAATAAAACCTTTATCCAATACAACCACAGACTCCTTCCTTGTATCGACTGACAGCGACTCCGCCCACAGTTGTTGCAAACAAACTCCACCGAGATGTACATATGGTAGAGTTGAGAAACCCAGCTACAATAAAACTAACTACAGAAACAACCATGGTAGACTTCAGAAACCCAGCTACAGGAAAACTAACAGTAGAAACAACGATGTACATATAGTAGAGTTGAGAAACTCAGCTACAATAAAACTAACTACAGAAACAATCATGGTAGACATCAGAAACCCAGCTACAGGAAAACTAACTACAGAAACAATCATGGTAGACTTCAGAAACCCAGCTACAGGAAAACTAACTACAAAAACAATGATGTACATATGGTAGAGTTGAGAAACCCAGCTACAATAAAACTAACTACAGAAACAATCATGGTAGACATCAGAAACCCAGCTACAGGAAAACTAACTACAGAAACAACCATGATAGACTTCAGAAACCCAGCTACAGGAAAACTAACAGTAGAAACAACGATGTACATATAGTAGAGTTGACAAACCCAGCTACAGGAAAACTAACTACAGAAACAACCATGGTAGACTTCAGAAACCCAGCTACAGGAAAACTAACAGTAGAAACAACAATGTACATATAGTAGAGTTGAGAAACCCAGCTACAATAAAACTAACTACAGAAACAACCATGGTAGAGTTCAGATACCCAGCTACAGGAAAACTACCATGGTAGACTTCAGAAACCCAGCTACAGGAAAACTAACTGTAGAAACGTGAATCAAACAGTACAGTGGGTACAATTGACATTGTGTAAGCCTGTGAAACTATGTTAAGTGTAGATGTTCTTTTCCCAAAGAAAATACCTGAGAAATCAAGTCAACGGATGCTAATCACCTACCAAGATGTAGAGATTtatctttgtgttgttgttgatgtccaACGTGAGAGACAAAGGATAATGAGTGCATGATTGTGTCCATGTTGTGTCTAAAGCCACAGTTAAGTCTCCTGCTTAACTCTCCTGCTCAAGCATCTGTGGTTTTGTGTTTAGATTTATCCCAACACTACTGTAAAATGTATCATTATTTATTCATGTGATTTTAGATTTGCTCATTTTTCTTAATAAATAACAATTTATATC
>XM_021604823.2
atatatatatatttatattctattTTCCTTTTAAGGCGAACAGCAAATTCCACTATTtaggctaatccttattgtggctagcttcacatagggTCTGACCATTCATCAAATTAGAACTGTTTTATAAATAAGGggtattttagatgatgacacctagatagatagttagctagctaactatagctactgaaacagatcatgtcgttttgctatgtttttgggggaagaacattgtttgtgtccattagctagctagcttttttataGCCAGCACCGTCCATAGCTTGGGGGAGTGTGTCTGCGGTCGTGAGGCAGCAGCCGGTGAGCGAAACAAAACTTTACCGGCATCATAGCACACGTATCagtgaatcgttgtgacatatgaaatacgagtgatagtctaatcaatgtgtaataattacataaacaatgaatgaacgtGTTGAATGATTACATGACGTGagagtcatattcaggtcctggttggtcaacaagcttatttgacgcTTCGAATAGTGTAAAACGGCGTTCCATACCAGCGAGGTAAATCAAGTGCACCCCACACAGGCAAATGGCTTGTTCTGATTGGTTAAAGAAAACCGGATGGCTGGTTAGGGGTTGATGGCCCTTCGTGAACGCCGAATATTGTGTGTAAATGATGAAGAAATAGGGTCAGTAATGTGAAATCCCTATAAATTGAACAATTTTAAACTCCcatttttattagattttttttttttttagcaaagcGTTAATTTAGAACTGTCTGAGAAAATCTTGTGGAAGATTACGGTTGAGCACCCCTAGTTACGTAATGGGTTAGTTCATCATTACTGTACAGCGGAAGGAGGAGGACGTCAATATACAACAGCGTATTTATCCCAACAGGAGAAATTCATACTATGTGGCTACCTAGTTAACTACCAAGTTAAAAATCCACGACACCATGCAAGCATAGATGACATCCCACCCCTCTAAACAGACCAACCACTTCAACTTTAAACAATTCTCTCATTCATCATCCCAGTCCTCTCTTCAATGCCTAACAGTGGGGATAGTTCAGGACCTAATGTGTCTGGGAGTCAGCCAGGCGACCAGGCTATGCCCTTGTCCCAGCGACCCCCACCccctgacagagaggatgaccaACGCGGCCTGCTGACCACTCTCACCCGGGACTCCCTGAGGACCCGGAGAGCCTCCAGCGCTGAGCTCCAGCTCCCATGGACCTGCCCTGTCACTCACTCCAGAGAGAAGTTCTACACGGTCTGCTCAGACTACGCCCTCCTCAACCAGGCTGCCTCTCTCTACCGGCTCCCCAGCACCCCCAGAGAGGTGGCCCACAGCAAGCAGGATGGCAGCGGGGCCCCATTAGTGAAGTCCAGCACTGTGGACCTGTCTCAGGGGCAGCCTGCAGGTGTAGAGGAGGCTTCAGACGAAGACTTTGACATGGAGGGGGTGTCCTGCAGCAACACCAAGCCTATCCTGGCTTGGGAGATTGATACCACTAACTTTGATGCTGTGCTAACTCGAAAGCCCAGGGCAAGCAACATAAAGAGAGTCGGTACTAAGAAGATGAAGTCTTCAGGGGGCAGTAGGAACCTGCAGGACCTTCCTCTCCACGCCTCGCAGGACGAGATCAAACAGAGGAAAGTCCTGGACCTCAGGAGATGGTACTGTATCAGCCGCCCCCAGTACAAGACGTCATGTGGGATATCTTCATTAGTTTCCTGCTGGAACTTTCTGTACAGCACACTAGGAGCAGGGAGTCTCCCACCCATCTCCCAGGAAGGGGCTCTTCAGATCCTAGGCTTCCAGCCTCCTTTCGAGGAGATTAAGTTTGGTCCCTTTACAGGCAACGCTACTCTGATGAGATGGTTCAGGCAAATCAATGACAATTTCCGTGTCCGAGGATGTTCCTATATTCTGTACAAACCCCACGGGAAACACAAGACAGCGGGAGAGACTGCTGAGGGGGCGTTGTTGAAGTTGACCCTGGGGTTAAGAGATGAAACCATGGCCTATATTTACCACTGTCAGAACCACTACTTCTGTCCTGTGGGCTTCGAGGCCACACCTTTCAAAGCAGCCAAGGCCTACAGGGGTACATTACCAACTAATGAAATGGAACACTGGATCCTGATTGGTGAACCAAGCAGGAAACACCCTGCTATTCACTGTAAAAAGTGGGCTGATATTGTTACagatctgaacacacaaaatccAGAATACCTTGATATTCGTCACACGGAGAGGGGAATTCAGTGCCGCAAAACCAAAAAGGTGGGAGGGAATCTTCACTGCATCATGGCTTTCCAGAGGGTCAACTGGCAGAAGCTAGGCCCCTGGGCCCTCAACCTGGAGAACCTGAGGCATGACCTCCACCACCAGGGGTCTGAGAGGGCCCAGGGGGGCTTAGCAGAGGTCCAGGAGGACAGGGAGAAGACCTCAGGAAAACACCAGGCTTTGGCCCGGCTAGGCCGCTCCAACAGCACAGGTACCAGTAACCAGAAGGACGTAGCTTGGaaacacctgtctaacaccacAGAGTACCGACACAGGAGCTCACCTGAGAGCGACGTTGAAGAAGATACCACAGATGACTGAGATTCAATGAGAAGGCTGTGAAATGAGTGCTGCTAAAATATACTGGTTAGTATATCAAACGTTTCTCAATCGTTTTtcaccaacaaaaaaaaagagcGAGAGACGAAAGTGTTGTTTTACCCCGTCTAGCATCATCCAGATTCCATCCAGGATTTTGCCTGATTATTGTAATGAAAAGTTAGTACAACATACAAGTTGATACACTTTAGTGTGAAAGCTACGTTTAATCGTCTAGCAATGTATAGAGGACTGCTGCTATTAATCAGAACGTCTGATAACATTGCATTTAAAAGCCATTTAAGAAATAAGAAGAATAAGAATAAAATCTATTAATTTTACACTTTTAAAGTGAGTGTGTTAGTTTGCGAATGTGACTGAAATCCAGTGACTACGGTAAGCCAAGTTTTTCTCAACTCCACGATGCACATCACATCAATGGAGTTGAGCGGAGACAACTACAACGAGTCGCTGTCGGTCGATAAACCCTTAccttgtacctatgtttgtcctctgtagcTGCCTTTCTTACTTCCTTAccttgtacctatgtttgtcctctgtagcTGCCTTTCTTACTTCCTTAccttgtacctatgtttgtcctctgtagcTGCCTTTCTTACTTCCTTAccttgtacctatgtttgtcctctgtagcTGCCTTTCTTACTTCCTTAccttgtacctatgtttgtcctctgtagcTGCCTTTCTTACTTCCTTAccttgtacctatgtttgtcctctgtagcTGCCTTTCTTACTTCCTTAccttgtacctatgtttgtcctctgtagcTGCCTTTCTTAATTCCTTAccttgtacctatgtttgtcctctgtagcTGCCTTTCTTACTTCCTTAccttgtacctatgtttgtcctctgtagcTGCCTTTCTTAATTCCTTAccttgtacctatgtttgtcctctgtagcTGCCTTTCTTACTTCCTTAccttgtacctatgtttgtcctctgtagcTGCCTTTCTTAATTCCTTAccttgtacctatgtttgtcctctgtagcTGCCTTTCTTAATTCCTTAccttgtacctatgtttgtcctctgtagcTGCCTTTCTTAATTCCTTAccttgtacctatgtttgtcctctgtagcTGCCTTTCTTAATTCCTTAccttgtacctatgtttgtcctctgtagcTGTCTTTCTTAATTCCTTAccttgtacctatgtttgtcctctgtagcTGTTTGTAGCTGTGTgcctttctttgtttgctgaTATCCATACTTTTTAATAAAACCTTTATCCAATACAACCACAGACTCCTTCCTTGTATCGACTGACAGCGACTCCGCCCACAGTTGTTGCAAACAAACTCCACCGAGATGTACATATGGTAGAGTTGAGAAACCCAGCTACAATAAAACTAACTACAGAAACAACCATGGTAGACTTCAGAAACCCAGCTACAGGAAAACTAACAGTAGAAACAACGATGTACATATAGTAGAGTTGAGAAACTCAGCTACAATAAAACTAACTACAGAAACAATCATGGTAGACATCAGAAACCCAGCTACAGGAAAACTAACTACAGAAACAATCATGGTAGACTTCAGAAACCCAGCTACAGGAAAACTAACTACAAAAACAATGATGTACATATGGTAGAGTTGAGAAACCCAGCTACAATAAAACTAACTACAGAAACAATCATGGTAGACATCAGAAACCCAGCTACAGGAAAACTAACTACAGAAACAACCATGATAGACTTCAGAAACCCAGCTACAGGAAAACTAACAGTAGAAACAACGATGTACATATAGTAGAGTTGACAAACCCAGCTACAGGAAAACTAACTACAGAAACAACCATGGTAGACTTCAGAAACCCAGCTACAGGAAAACTAACAGTAGAAACAACAATGTACATATAGTAGAGTTGAGAAACCCAGCTACAATAAAACTAACTACAGAAACAACCATGGTAGAGTTCAGATACCCAGCTACAGGAAAACTACCATGGTAGACTTCAGAAACCCAGCTACAGGAAAACTAACTGTAGAAACGTGAATCAAACAGTACAGTGGGTACAATTGACATTGTGTAAGCCTGTGAAACTATGTTAAGTGTAGATGTTCTTTTCCCAAAGAAAATACCTGAGAAATCAAGTCAACGGATGCTAATCACCTACCAAGATGTAGAGATTtatctttgtgttgttgttgatgtccaACGTGAGAGACAAAGGATAATGAGTGCATGATTGTGTCCATGTTGTGTCTAAAGCCACAGTTAAGTCTCCTGCTTAACTCTCCTGCTCAAGCATCTGTGGTTTTGTGTTTAGATTTATCCCAACACTACTGTAAAATGTATCATTATTTATTCATGTGATTTTAGATTTGCTCATTTTTCTTAATAAATAACAATTTATATC

Function

symbol description
bivm Orthologous to human BIVM (basic, immunoglobulin-like variable motif containing).

NR:

description
basic immunoglobulin-like variable motif-containing protein

GO: NA

KEGG:

id description
K10846 ERCC5, XPG, RAD2; DNA excision repair protein ERCC-5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021604825.2 False 5028 mRNA 0.44 10 99159906 99178822
XM_021604823.2 True 5024 mRNA 0.44 10 99159915 99178822

Neighbor

gene id symbol gene type direction distance location
LOC110523047 LOC106560665 coding upstream 58836 99061377 ~ 99101070 (+)
oca2 LOC106591054 coding upstream 717641 98276682 ~ 98442265 (+)
herc2 herc2 coding upstream 911017 97997425 ~ 98248889 (+)
LOC110524889 LOC106590724 coding upstream 1191986 97888379 ~ 97967920 (+)
LOC118964703 NA coding upstream 1197613 97960504 ~ 97962293 (+)
LOC110523045 NA coding downstream 17518 99196283 ~ 99207807 (+)
LOC110490602 LOC106560622 coding downstream 195333 99374155 ~ 99401558 (+)
LOC118964709 NA coding downstream 966781 100145603 ~ 100157146 (+)
si:ch211-121a2.4 LOC106560711 coding downstream 1004105 100182927 ~ 100191165 (+)
LOC110524906 NA coding downstream 1045389 100224211 ~ 100226348 (+)
G462291 NA non-coding upstream 2081 99157533 ~ 99157825 (+)
G462290 NA non-coding upstream 2442 99157166 ~ 99157464 (+)
G462286 NA non-coding upstream 6516 99153164 ~ 99153390 (+)
G462279 NA non-coding upstream 13708 99145714 ~ 99146198 (+)
G462274 NA non-coding upstream 23621 99135979 ~ 99136285 (+)
G462300 NA non-coding downstream 3010 99181832 ~ 99182033 (+)
G462302 NA non-coding downstream 6308 99185130 ~ 99185631 (+)
G462303 NA non-coding downstream 7096 99185918 ~ 99187059 (+)
G462307 NA non-coding downstream 14678 99193500 ~ 99193728 (+)
G462233 NA other upstream 100552 99058883 ~ 99059354 (+)
G462037 NA other upstream 326995 98832457 ~ 98834433 (+)
G461999 NA other upstream 380839 98774482 ~ 98779067 (+)
G461826 NA other upstream 482843 98674256 ~ 98677063 (+)
G462549 NA other downstream 304561 99483383 ~ 99483960 (+)
G462762 NA other downstream 887747 100050135 ~ 100089049 (+)
G463119 NA other downstream 992315 100171137 ~ 100171897 (+)
G463139 NA other downstream 1047682 100226504 ~ 100230232 (+)

Expression


Co-expression Network