LOC110523045



Basic Information


Item Value
gene id LOC110523045
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 99196283 ~ 99207807 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XR_005051595.1
CTCAGGAGGAGCTGTTTTCCTTCCTGGCAGAGTGATATGACTCAAGTGTTGCTCTCCTGAGCCGTTATCAGCTGCTGTTCTACCAGAAAGatggctctgtggagatgTTTGATGTGAAAAACCAGCGCACCTTGTTGAGGAGGACCAAATGCCATGACCTTCACCAGGAGGACCTCTTTGTGGGGGAACCGTGTGAATGTGTTCTCCTGCCAACTCAATCTGATTGTATATTGGGGACCAGTATACAGGAAACAAGCTCGGCAGCAAGAAAGAGAGGAAGCAGGCGGCAGACTTTTACACTGAACATCAGACAAAGTCTTTCTTCAACCACCTGGAAGCAATTTATGATCTCTGGGCCTGGGGTTGCCATGGAGTTGATGGGTGAAGAGGCAGTGTCAGTATGAAGAACGATTAGATAGATCTAGGCCCCACTGACTGGGATGTGGCACGGAAAGAGGCCCGACCAAGCCTCAGAGCCCAGGTTGGCACAGATCACACCAGAAATGCTGGACATGGGTCTGACTCACTGGCTTCAGCAGCAAGAGTAAGTCATTCtagtagagagaacaggagagggccTAGTACCGAGCCCTTGGGGACAGCAGTAGAGCGAACAGCAGATGCTCTAATACTGATCCTTGGGGGACACCAGTAATGAGAACAGGTGAGGGCCTAGTACAGAGCCCTGGGGTACACCAGTAGTGAGAAAAGGAGAGGGCCTAGTACAGAGCCCTGGGGTACACCAGTAGTGAGAAAAGGAGAGGGCCTAGTACAGAGCCCCGGGGTACACCAGTAATGAGTAATGTTTTGTTATATTGTTTAGGAACTggaattttttgtttttttgtttaggAACTggacttgatgattgagttggaggcgtgcatggccatgcagtcatgggtgaacagggagtaca
>TU524359
CTTGTACCCTGCATCCTTAACCTGCGTTTGATCACTGTCTTACATCCCTCTGTTTCCCTCAGGAGGAGCTGTTTTCCTTCCTGGCAGAGTGATATGACTCAAGTGTTGCTCTCCTGAGCCGTTATCAGCTGCTGTTCTACCAGAAAGatggctctgtggagatggtaagCGTTAGGCAAGATAATCACATGACCCATGGGAGTAGGCAGGCCAGGGG

Function


NR:

description
nucleoside diphosphate kinase 7-like

GO:

id name namespace
GO:0006796 phosphate-containing compound metabolic process biological_process

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005051595.1 False 919 mRNA 0.50 4 99196340 99207807
TU524359 True 217 lncRNA 0.51 1 99196283 99196499

Neighbor


gene id symbol gene type direction distance location
LOC110524867 bivm coding upstream 17518 99159906 ~ 99178822 (+)
LOC110523047 LOC106560665 coding upstream 95270 99061377 ~ 99101070 (+)
oca2 LOC106591054 coding upstream 754075 98276682 ~ 98442265 (+)
herc2 herc2 coding upstream 947451 97997425 ~ 98248889 (+)
LOC110524889 LOC106590724 coding upstream 1228420 97888379 ~ 97967920 (+)
LOC110490602 LOC106560622 coding downstream 166348 99374155 ~ 99401558 (+)
LOC118964709 NA coding downstream 937796 100145603 ~ 100157146 (+)
si:ch211-121a2.4 LOC106560711 coding downstream 975120 100182927 ~ 100191165 (+)
LOC110524906 NA coding downstream 1016404 100224211 ~ 100226348 (+)
LOC110524909 LOC106921341 coding downstream 1212460 100420267 ~ 100449778 (+)
G462307 NA non-coding upstream 2612 99193500 ~ 99193728 (+)
G462303 NA non-coding upstream 9281 99185918 ~ 99187059 (+)
G462302 NA non-coding upstream 10709 99185130 ~ 99185631 (+)
G462300 NA non-coding upstream 14307 99181832 ~ 99182033 (+)
G462294 NA non-coding upstream 29759 99165410 ~ 99166581 (+)
G462404 NA non-coding downstream 7532 99215339 ~ 99215732 (+)
G462405 NA non-coding downstream 8096 99215903 ~ 99216142 (+)
G462407 NA non-coding downstream 9569 99217376 ~ 99217583 (+)
G462414 NA non-coding downstream 20605 99228412 ~ 99250106 (+)
G462431 NA non-coding downstream 51823 99259630 ~ 99260133 (+)
G462233 NA other upstream 136986 99058883 ~ 99059354 (+)
G462037 NA other upstream 363429 98832457 ~ 98834433 (+)
G461999 NA other upstream 417273 98774482 ~ 98779067 (+)
G461826 NA other upstream 519277 98674256 ~ 98677063 (+)
G462549 NA other downstream 275576 99483383 ~ 99483960 (+)
G462762 NA other downstream 858762 100050135 ~ 100089049 (+)
G463119 NA other downstream 963330 100171137 ~ 100171897 (+)
G463139 NA other downstream 1018697 100226504 ~ 100230232 (+)
LOC118964703 NA coding upstream 1233990 97960504 ~ 97962293 (+)

Expression



Co-expression Network