G357078


Basic Information

Item Value
gene id G357078
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 64922 ~ 145934 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU405228
cacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttatccaggtattctagttgagaacacctttatttaaccaggtaggctagtggagaacacctttatttaaccaggtaggctagtggagaacacctttatttaaccaggtaggctagtggagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggccagttgagaacacctttatttaaccaggtaggctagttgagaacatctttatttaaccaggtaggcaagttgagaacaagttctcatttacaattgcgacctggccaagataaagcaaagcagttcgacagatacaacgacacagagttacacatggagtaaaacaaacatacagtcaataatacagtataaacaagtctatatac
>TU405230
caggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttatccaggtaggctagttgagaacacctttatttaaccaggtaggctagtggagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaagtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagtggagaacacctttatttaaccaggtaggctagttgagaacatctttatttaaccaggtaggcaagttgagaacaagttctcatttacaattgcgacctggccaagataaagcaaagcagttcgacagatacaacgacacagagttacacatggagtaaaacaaacatacagtcaataatacagtataaacaagtctatatac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106587709, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU405228 False 625 lncRNA 0.39 3 64922 145934
TU405230 True 479 lncRNA 0.39 2 143839 145934

Neighbor

gene id symbol gene type direction distance location
LOC110523064 LOC106572881 coding downstream 79075 224811 ~ 285133 (+)
LOC110524922 LOC106572882 coding downstream 150692 296626 ~ 312598 (+)
LOC110523070 inip coding downstream 264827 410761 ~ 416534 (+)
LOC110524924 ptbp3 coding downstream 336491 482425 ~ 599279 (+)
LOC110523098 NA coding downstream 587077 733011 ~ 737553 (+)
G357071 NA non-coding upstream 13927 47840 ~ 50995 (+)
G357065 NA non-coding upstream 17328 45939 ~ 47594 (+)
G357118 NA non-coding downstream 3226 149160 ~ 152502 (+)
G357120 NA non-coding downstream 8808 154742 ~ 155312 (+)
G357126 NA non-coding downstream 26130 172064 ~ 172279 (+)
G357129 NA non-coding downstream 31012 176946 ~ 177162 (+)
G357130 NA non-coding downstream 32729 178663 ~ 178920 (+)
G357136 NA other downstream 54783 200717 ~ 201642 (+)
G357564 NA other downstream 793134 939068 ~ 939873 (+)
G357565 NA other downstream 794301 940235 ~ 940741 (+)
G358042 NA other downstream 1242461 1388395 ~ 1390468 (+)

Expression


Co-expression Network