G357109



Basic Information


Item Value
gene id G357109
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 113360 ~ 118405 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU405262
caactgactaggtatccccctttccctttccaactgactaggtatccccctttccaactgactaggtatccccctttccaacggACTATGTATCACGCTTttcctttacaactgactaggtatccccctttccaactgactaggtatccccctttccctttccaactgactaggtatccccctttaatTCTGATtatgtatccccctttacaactgactaggcatcccaatttccctttacaactgactaggtatccccctttccctttccaactgactaggtatccccctttccaactgactaggtatccccctttccctttccaactgactaggtatccccctttccatttccaactgactaggtatccccctttccctttccaactgactaggtatccccctttccaactgactagata

Function


NR:

description
PREDICTED: extensin-1-like isoform X1

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU405262 True 422 lncRNA 0.47 3 113360 118405
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110523064 LOC106572881 coding downstream 106604 224811 ~ 285133 (+)
LOC110524922 LOC106572882 coding downstream 178221 296626 ~ 312598 (+)
LOC110523070 inip coding downstream 292356 410761 ~ 416534 (+)
LOC110524924 ptbp3 coding downstream 364020 482425 ~ 599279 (+)
LOC110523098 NA coding downstream 614606 733011 ~ 737553 (+)
G357064 NA non-coding upstream 43556 19502 ~ 69804 (+)
G357114 NA non-coding downstream 23770 142175 ~ 143689 (+)
G357118 NA non-coding downstream 30755 149160 ~ 152502 (+)
G357120 NA non-coding downstream 36337 154742 ~ 155312 (+)
G357126 NA non-coding downstream 53659 172064 ~ 172279 (+)
G357129 NA non-coding downstream 58541 176946 ~ 177162 (+)
G357136 NA other downstream 82312 200717 ~ 201642 (+)
G357564 NA other downstream 820663 939068 ~ 939873 (+)
G357565 NA other downstream 821830 940235 ~ 940741 (+)
G358042 NA other downstream 1269990 1388395 ~ 1390468 (+)

Expression


G357109 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 8.
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G357109 Expression in each Bioproject

Bar chart with 13 bars.
G357109 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
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Co-expression Network