G357140



Basic Information


Item Value
gene id G357140
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 217199 ~ 217477 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU405304
CAACACAGGGAGAGCTCAACACAAAGACAGGTCAACACAGAgagatcaacacagagagagcTCAACACAAAGAGAGGTCAACACAGAGAGAGCTCAACACAAAGAGAggtcaacacagagagaggtcaaCACAGCTCAACACAAAGAGAGATCAACACAGGGAGAGCTCAACACAAAGAGAGGTCAACACAGAgagatcaacacagagagagcTCAACACAAAGAGAggtcaacacagagagaggtcaaCACAGCTCAACACAAAGAGGTCAACACAGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU405304 True 279 lncRNA 0.47 1 217199 217477

Neighbor


gene id symbol gene type direction distance location
palm2akap2 LOC106568584 coding upstream 30860 89048 ~ 186339 (+)
LOC110523064 LOC106572881 coding downstream 7532 224811 ~ 285133 (+)
LOC110524922 LOC106572882 coding downstream 79149 296626 ~ 312598 (+)
LOC110523070 inip coding downstream 193284 410761 ~ 416534 (+)
LOC110524924 ptbp3 coding downstream 264948 482425 ~ 599279 (+)
LOC110523098 NA coding downstream 515534 733011 ~ 737553 (+)
G357139 NA non-coding upstream 388 209882 ~ 216811 (+)
G357137 NA non-coding upstream 7856 206569 ~ 209343 (+)
G357138 NA non-coding upstream 13897 202595 ~ 203302 (+)
G357135 NA non-coding upstream 18586 198324 ~ 198613 (+)
G357131 NA non-coding upstream 37847 179049 ~ 179352 (+)
G357143 NA non-coding downstream 2288 219765 ~ 220018 (+)
G357146 NA non-coding downstream 6845 224322 ~ 224532 (+)
G357150 NA non-coding downstream 10556 228033 ~ 228234 (+)
G357152 NA non-coding downstream 12148 229625 ~ 229846 (+)
G357136 NA other upstream 15557 200717 ~ 201642 (+)
G357564 NA other downstream 721591 939068 ~ 939873 (+)
G357565 NA other downstream 722758 940235 ~ 940741 (+)
G358042 NA other downstream 1170918 1388395 ~ 1390468 (+)
G358076 NA other downstream 1257318 1474795 ~ 1475734 (+)

Expression



Co-expression Network