G357152


Basic Information

Item Value
gene id G357152
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 229625 ~ 229846 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU405317
gagcggaccaagtaattgggcgtcactctaaagcgggaaggtggaataaacgagtcaggagtaggttttcttgattgaacacagttctctattgagggcatttggtcaacacaaacattccaacataatcaatgaaaatcttccaaggaaaaacatacatcttcttctccagatgaaacaggaacacaataggcttatctttaaactacaacaaaaagtcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU405317 True 222 lncRNA 0.39 1 229625 229846

Neighbor

gene id symbol gene type direction distance location
palm2akap2 LOC106568584 coding upstream 43286 89048 ~ 186339 (+)
LOC110524922 LOC106572882 coding downstream 66780 296626 ~ 312598 (+)
LOC110523070 inip coding downstream 180915 410761 ~ 416534 (+)
LOC110524924 ptbp3 coding downstream 252579 482425 ~ 599279 (+)
LOC110523098 NA coding downstream 503165 733011 ~ 737553 (+)
LOC110523075 hook3 coding downstream 991817 1221663 ~ 1298618 (+)
G357150 NA non-coding upstream 1391 228033 ~ 228234 (+)
LOC110523064 LOC106572881 non-coding upstream 4569 224811 ~ 285133 (+)
G357146 NA non-coding upstream 5093 224322 ~ 224532 (+)
G357143 NA non-coding upstream 9607 219765 ~ 220018 (+)
G357140 NA non-coding upstream 12148 217199 ~ 217477 (+)
G357167 NA non-coding downstream 21211 251057 ~ 251604 (+)
G357172 NA non-coding downstream 32959 262805 ~ 263020 (+)
G357180 NA non-coding downstream 63514 293360 ~ 293614 (+)
G357181 NA non-coding downstream 64153 293999 ~ 294234 (+)
G357325 NA non-coding downstream 109815 339661 ~ 340520 (+)
G357136 NA other upstream 27983 200717 ~ 201642 (+)
G357564 NA other downstream 709222 939068 ~ 939873 (+)
G357565 NA other downstream 710389 940235 ~ 940741 (+)
G358042 NA other downstream 1158549 1388395 ~ 1390468 (+)
G358076 NA other downstream 1244949 1474795 ~ 1475734 (+)

Expression


Co-expression Network