G357180


Basic Information

Item Value
gene id G357180
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 293360 ~ 293614 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU405354
ACTTCCAGGAGTAAGAGGATGTCCTCCGTAAGGCATCACGAGCGGCTGCCATCACCTACGACGGCCAGAATATTCGCATTTACCCAGACTACACGGCAGCAGTCATGAAGAAGAGGTCAGCctttctgcctaccctgacctcgagcctgcctgaccattcagcctaccctgacctcgagcctgcctgaccattcagcctaccctgaccattcagcctaccctgacctcgagcctgcctgaccattcagcctacCC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106512146

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU405354 True 255 lncRNA 0.57 1 293360 293614

Neighbor

gene id symbol gene type direction distance location
LOC110523064 LOC106572881 coding upstream 8227 224811 ~ 285133 (+)
palm2akap2 LOC106568584 coding upstream 107021 89048 ~ 186339 (+)
LOC110524922 LOC106572882 coding downstream 3012 296626 ~ 312598 (+)
LOC110523070 inip coding downstream 117147 410761 ~ 416534 (+)
LOC110524924 ptbp3 coding downstream 188811 482425 ~ 599279 (+)
LOC110523098 NA coding downstream 439397 733011 ~ 737553 (+)
LOC110523075 hook3 coding downstream 928049 1221663 ~ 1298618 (+)
G357172 NA non-coding upstream 30340 262805 ~ 263020 (+)
G357167 NA non-coding upstream 41756 251057 ~ 251604 (+)
G357152 NA non-coding upstream 63514 229625 ~ 229846 (+)
G357150 NA non-coding upstream 65126 228033 ~ 228234 (+)
G357181 NA non-coding downstream 385 293999 ~ 294234 (+)
G357325 NA non-coding downstream 46047 339661 ~ 340520 (+)
G357330 NA non-coding downstream 49667 343281 ~ 345524 (+)
G357352 NA non-coding downstream 99700 393314 ~ 482303 (+)
G357353 NA non-coding downstream 105182 398796 ~ 401594 (+)
G357136 NA other upstream 91718 200717 ~ 201642 (+)
G357564 NA other downstream 645454 939068 ~ 939873 (+)
G357565 NA other downstream 646621 940235 ~ 940741 (+)
G358042 NA other downstream 1094781 1388395 ~ 1390468 (+)
G358076 NA other downstream 1181181 1474795 ~ 1475734 (+)

Expression


Co-expression Network