G357401


Basic Information

Item Value
gene id G357401
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 548938 ~ 565947 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU405679
ggttataggttatactgtaggttacaggttacaggttatactgtaggttacaggttacacgttatactgtaggttataggttatactgtaggttataggttacaggttatactgtaggttacaggttatactgtaggttataggtaatattgtaggttacaggttatactgtaggttacaggttatactgtaggttacaggttatactgtaggttacaggttatactgtaggttataggttatactgtaggttataggttatactgtaggttacaggttatactgtaggttacaggttatattgtaggttataggttatactgtaggttacaggatATACTGTAGGTtgcaggttacaggttatactgtaggttacaggttatactgtaggttatactctaggttacatgttatactgtaggttacaggttacactgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU405679 True 438 lncRNA 0.35 5 548938 565947

Neighbor

gene id symbol gene type direction distance location
LOC110523070 inip coding upstream 132404 410761 ~ 416534 (+)
LOC110524922 LOC106572882 coding upstream 236340 296626 ~ 312598 (+)
LOC110523064 LOC106572881 coding upstream 263805 224811 ~ 285133 (+)
palm2akap2 LOC106568584 coding upstream 362599 89048 ~ 186339 (+)
LOC110523098 NA coding downstream 167064 733011 ~ 737553 (+)
LOC110523075 hook3 coding downstream 655716 1221663 ~ 1298618 (+)
LOC118964551 NA coding downstream 661670 1227617 ~ 1228033 (+)
LOC118964548 NA coding downstream 662140 1228087 ~ 1232244 (+)
LOC118964547 NA coding downstream 680054 1246001 ~ 1249676 (+)
G357400 NA non-coding upstream 14894 533686 ~ 534044 (+)
G357352 NA non-coding upstream 66635 393314 ~ 482303 (+)
G357332 LOC106572866 non-coding upstream 124813 421843 ~ 424125 (+)
G357329 NA non-coding upstream 128155 401734 ~ 420783 (+)
G357353 NA non-coding upstream 147344 398796 ~ 401594 (+)
G357403 NA non-coding downstream 9688 575635 ~ 576663 (+)
G357419 NA non-coding downstream 62645 628592 ~ 629232 (+)
G357426 NA non-coding downstream 80547 646494 ~ 646821 (+)
G357440 NA non-coding downstream 93083 659030 ~ 659792 (+)
G357455 NA non-coding downstream 114312 680259 ~ 681503 (+)
G357136 NA other upstream 347296 200717 ~ 201642 (+)
G357564 NA other downstream 373121 939068 ~ 939873 (+)
G357565 NA other downstream 374288 940235 ~ 940741 (+)
G358042 NA other downstream 822448 1388395 ~ 1390468 (+)
G358076 NA other downstream 908848 1474795 ~ 1475734 (+)
LOC110523096 NA other downstream 1334416 1897358 ~ 1904914 (+)

Expression


Co-expression Network