G357455


Basic Information

Item Value
gene id G357455
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 680259 ~ 681503 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU405751
CTACTAGATACCAAGCCACTAGGGAAAGTAAGAGCTGGTACTACTAGATACCAAGCCACTAGGTAAAGTAAGAGCTGGTACTACTAGATACCAAGCCACTAGGGAAAGTAAGAGCGGGTACTACTAGATACCAAGCCACTAGGGAAAGTAAGAGCTGGTACTACTAGATACCAAGCCACTAGGTAAAGTAAGAGCTGGTACTACTAGATACCAAGCCACTAGGGAAAGTAAGAGCGGGTACTACTAGATACCAAGCCACTAGGTAAAGTAAGAGCTGGTACTACTAGATACCAAGCCACTAGGTAAAGTAAGAGCTGGTACTACTAGATACCAAGCCACTAGGTAAAGTAAGAGCTGGTACTACTAGATACCAAGCCACTAGGTAAAGTAAGAGCTGGTACTACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU405751 True 405 lncRNA 0.44 2 680259 681503

Neighbor

gene id symbol gene type direction distance location
LOC110524924 ptbp3 coding upstream 80980 482425 ~ 599279 (+)
LOC110523070 inip coding upstream 263725 410761 ~ 416534 (+)
LOC110524922 LOC106572882 coding upstream 367661 296626 ~ 312598 (+)
LOC110523064 LOC106572881 coding upstream 395126 224811 ~ 285133 (+)
palm2akap2 LOC106568584 coding upstream 493920 89048 ~ 186339 (+)
LOC110523098 NA coding downstream 51508 733011 ~ 737553 (+)
LOC110523075 hook3 coding downstream 540160 1221663 ~ 1298618 (+)
LOC118964551 NA coding downstream 546114 1227617 ~ 1228033 (+)
LOC118964548 NA coding downstream 546584 1228087 ~ 1232244 (+)
LOC118964547 NA coding downstream 564498 1246001 ~ 1249676 (+)
G357440 NA non-coding upstream 20467 659030 ~ 659792 (+)
G357426 NA non-coding upstream 33438 646494 ~ 646821 (+)
G357419 NA non-coding upstream 51027 628592 ~ 629232 (+)
G357403 NA non-coding upstream 103596 575635 ~ 576663 (+)
G357401 NA non-coding upstream 114312 548938 ~ 565947 (+)
G357459 NA non-coding downstream 8054 689557 ~ 698914 (+)
G357463 NA non-coding downstream 17855 699358 ~ 699559 (+)
G357464 NA non-coding downstream 23150 704653 ~ 707576 (+)
G357465 NA non-coding downstream 23182 704685 ~ 709239 (+)
G357476 NA non-coding downstream 35194 716697 ~ 716908 (+)
G357136 NA other upstream 478617 200717 ~ 201642 (+)
G357564 NA other downstream 257565 939068 ~ 939873 (+)
G357565 NA other downstream 258732 940235 ~ 940741 (+)
G358042 NA other downstream 706892 1388395 ~ 1390468 (+)
G358076 NA other downstream 793292 1474795 ~ 1475734 (+)
LOC110523096 NA other downstream 1218860 1897358 ~ 1904914 (+)

Expression


Co-expression Network