G357459


Basic Information

Item Value
gene id G357459
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 689557 ~ 698914 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU405757
CCTCACTAAATTCTTGTTGATGTTGCTAATTACTATAACATATACTACAGAGATGATTTAGCATTGAATTGTAAATGATGTGTAGCAACCACAGTCTGAGGGGCAGATTTGATTTCATCATGTTATGATAAACAATAAACATAGGTGGTGTATTTGGGTCAAAGcctaattccctatatagtacactacttttgaccaaagtcttatgtgccctggtcaaaagtatcgCAGGTCTATATGAAATAGGGTCCATAtgtgggacacagacagacagtgatttTAAACACAAGTAAACCCAATGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU405757 True 304 lncRNA 0.37 2 689557 698914

Neighbor

gene id symbol gene type direction distance location
LOC110524924 ptbp3 coding upstream 90278 482425 ~ 599279 (+)
LOC110523070 inip coding upstream 273023 410761 ~ 416534 (+)
LOC110524922 LOC106572882 coding upstream 376959 296626 ~ 312598 (+)
LOC110523064 LOC106572881 coding upstream 404424 224811 ~ 285133 (+)
palm2akap2 LOC106568584 coding upstream 503218 89048 ~ 186339 (+)
LOC110523098 NA coding downstream 34097 733011 ~ 737553 (+)
LOC110523075 hook3 coding downstream 522749 1221663 ~ 1298618 (+)
LOC118964551 NA coding downstream 528703 1227617 ~ 1228033 (+)
LOC118964548 NA coding downstream 529173 1228087 ~ 1232244 (+)
LOC118964547 NA coding downstream 547087 1246001 ~ 1249676 (+)
G357455 NA non-coding upstream 8054 680259 ~ 681503 (+)
G357440 NA non-coding upstream 29765 659030 ~ 659792 (+)
G357426 NA non-coding upstream 42736 646494 ~ 646821 (+)
G357419 NA non-coding upstream 60325 628592 ~ 629232 (+)
G357403 NA non-coding upstream 112894 575635 ~ 576663 (+)
G357463 NA non-coding downstream 444 699358 ~ 699559 (+)
G357464 NA non-coding downstream 5739 704653 ~ 707576 (+)
G357465 NA non-coding downstream 5771 704685 ~ 709239 (+)
G357476 NA non-coding downstream 17783 716697 ~ 716908 (+)
G357474 NA non-coding downstream 18137 717051 ~ 718970 (+)
G357136 NA other upstream 487915 200717 ~ 201642 (+)
G357564 NA other downstream 240154 939068 ~ 939873 (+)
G357565 NA other downstream 241321 940235 ~ 940741 (+)
G358042 NA other downstream 689481 1388395 ~ 1390468 (+)
G358076 NA other downstream 775881 1474795 ~ 1475734 (+)
LOC110523096 NA other downstream 1201449 1897358 ~ 1904914 (+)

Expression


Co-expression Network