G357475



Basic Information


Item Value
gene id G357475
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 719112 ~ 719685 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU405792
GTATATTTTTGGGGAAATGTTAACTGATTGGACAAGATGGGTTGCAAGATGAGCAGTGACTCTCCTTGGTGTGTAAACTCTAGATTTGGAAAGTAGAATAGCTCCTGATCCTGAGTAGAGTGGACCCCACTAGCTCCCGAGTAGAGTGGACGCCACTAGCTCCCGAGTAGAGTGGACCCCACTAGCTCCCGAGTAGAGTGGACCCCACTAGCTCCCGAGTAGAGTGGACCCCACTAGCTCCCGAGTAGAGTGGACCCCACTAGCGCCTGAGTGGACCCCACTAGCACCTGAGTAGAGTGGACGCCACTAGCTCCCGAGTAGAGTGGACCCCACTAGCTCCCGAGTAGAGTGGACCCCACTAGCTCCCGAGTAGAGTGGACCCCACTAGCTCCCGAGTAGAGTGGACCCCACTAGCTCCCGAGTAGAGTGGACCCCACTAGCGCCTGAGTAGAGTGGACCCCACTAGCTCCCGAGTAGAGTGGACCCCACTAGCGCCCGAGTAGAGTGGACCCCACTAGCTCCCGAGTAGAGTGGACCCCACTAGCTCCCGAGTAGAGTGGACCCCACTAGCTCC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU405792 True 574 lncRNA 0.57 1 719112 719685

Neighbor


gene id symbol gene type direction distance location
LOC110524924 ptbp3 coding upstream 119833 482425 ~ 599279 (+)
LOC110523070 inip coding upstream 302578 410761 ~ 416534 (+)
LOC110524922 LOC106572882 coding upstream 406514 296626 ~ 312598 (+)
LOC110523064 LOC106572881 coding upstream 433979 224811 ~ 285133 (+)
palm2akap2 LOC106568584 coding upstream 532773 89048 ~ 186339 (+)
LOC110523098 NA coding downstream 13326 733011 ~ 737553 (+)
LOC110523075 hook3 coding downstream 501978 1221663 ~ 1298618 (+)
LOC118964551 NA coding downstream 507932 1227617 ~ 1228033 (+)
LOC118964548 NA coding downstream 508402 1228087 ~ 1232244 (+)
LOC118964547 NA coding downstream 526316 1246001 ~ 1249676 (+)
G357474 NA non-coding upstream 142 717051 ~ 718970 (+)
G357476 NA non-coding upstream 2204 716697 ~ 716908 (+)
G357465 NA non-coding upstream 9873 704685 ~ 709239 (+)
G357464 NA non-coding upstream 11536 704653 ~ 707576 (+)
G357463 NA non-coding upstream 19553 699358 ~ 699559 (+)
G357486 NA non-coding downstream 43093 762778 ~ 768784 (+)
G357498 NA non-coding downstream 74544 794229 ~ 795596 (+)
G357501 NA non-coding downstream 84746 804431 ~ 805222 (+)
G357502 NA non-coding downstream 85554 805239 ~ 806038 (+)
G357136 NA other upstream 517470 200717 ~ 201642 (+)
G357564 NA other downstream 219383 939068 ~ 939873 (+)
G357565 NA other downstream 220550 940235 ~ 940741 (+)
G358042 NA other downstream 668710 1388395 ~ 1390468 (+)
G358076 NA other downstream 755110 1474795 ~ 1475734 (+)
LOC110523096 NA other downstream 1180678 1897358 ~ 1904914 (+)

Expression



Co-expression Network