G357486


Basic Information

Item Value
gene id G357486
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 762778 ~ 768784 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU405803
tagtgttatataaatattcatacacatagctcatataaacaaagacattccgtagtaagaacacatacacccagccataagactgaccccctcttccttatataaacacacatctcatctccctctaactggcctgtcccaagagcaaagaacttttgctgtgcaccaatggggcccgctctggctagagcaaggcccgcctccaaccctccgaccagtcaagaagaccgaaacgacaagactccacctactttattctatgtataaaaatgtatgtaaccattgtataggcctctttttcacctggctccttgccgagttatgtgaactaggtccgtgcacgtaaaactgcgggacaagatatccctgactcattaaaactgtcttttgttacaactgaaattcactctgtccagcgtccgtgatttggtctcaactctccag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU405803 True 444 lncRNA 0.45 2 762778 768784

Neighbor

gene id symbol gene type direction distance location
LOC110523098 NA coding upstream 26987 733011 ~ 737553 (+)
LOC110524924 ptbp3 coding upstream 163499 482425 ~ 599279 (+)
LOC110523070 inip coding upstream 346244 410761 ~ 416534 (+)
LOC110524922 LOC106572882 coding upstream 450180 296626 ~ 312598 (+)
LOC110523064 LOC106572881 coding upstream 477645 224811 ~ 285133 (+)
LOC110523075 hook3 coding downstream 452879 1221663 ~ 1298618 (+)
LOC118964551 NA coding downstream 458833 1227617 ~ 1228033 (+)
LOC118964548 NA coding downstream 459303 1228087 ~ 1232244 (+)
LOC118964547 NA coding downstream 477217 1246001 ~ 1249676 (+)
LOC118964550 NA coding downstream 484041 1252825 ~ 1255902 (+)
G357475 NA non-coding upstream 43093 719112 ~ 719685 (+)
G357474 NA non-coding upstream 43808 717051 ~ 718970 (+)
G357476 NA non-coding upstream 45870 716697 ~ 716908 (+)
G357465 NA non-coding upstream 53539 704685 ~ 709239 (+)
G357498 NA non-coding downstream 25445 794229 ~ 795596 (+)
G357501 NA non-coding downstream 35647 804431 ~ 805222 (+)
G357502 NA non-coding downstream 36455 805239 ~ 806038 (+)
G357508 NA non-coding downstream 43825 812609 ~ 863881 (+)
G357514 NA non-coding downstream 50681 819465 ~ 821862 (+)
G357136 NA other upstream 561136 200717 ~ 201642 (+)
G357564 NA other downstream 170284 939068 ~ 939873 (+)
G357565 NA other downstream 171451 940235 ~ 940741 (+)
G358042 NA other downstream 619611 1388395 ~ 1390468 (+)
G358076 NA other downstream 706011 1474795 ~ 1475734 (+)
LOC110523096 NA other downstream 1131579 1897358 ~ 1904914 (+)

Expression


Co-expression Network