G357501


Basic Information

Item Value
gene id G357501
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 804431 ~ 805222 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU405824
CTGAGAGACATGCTGTCTGTAGTGATAGAGCTGGAATAGGAGGAAAACAGAGCTGGTAGCGATGAGGAGGGCCAGAACCGCTGTTTTGTTAAAGCGAAGCATCAGTCCTCCTTAGTTGCTTTGGCACAGCAGAGCCAAAGATGTCATCTGTGGGAGAGCGGTAGTAGTGTTGAGGTGGCCCTCTACTGTGGTAGAGCGGTAGTAGTGTTGAGGTGGCCCTCTACTGTGGTAGAGCGGTAGTAGTGTTGAGGTGGCCCTCTACTGTGGTAGAACGGTAGTAGTGTTGAGGTGGCCCTCTAACCATGTTCATCAGATGGCAgggatactgagagagag
>TU405827
CTGAGAGACATGCTGTCTGTAGTGATAGAGCTGGAATAGGAGGAAAACAGAGCTGGTAGCGATGAGGAGGGCCAGAACCGCTGTTTTGTTAAAGCGAAGCATCAGTCCTCCTTAGTTGCTTTGGCACAGCAGAGCCAAAGATGTCATCTGTGGGAGAGCGGTAGTAGTGTTGAGGTGGCCCTCTACTGTGGTGGAACGGTAGTAGTGTTGAGGTGGCCCTCTACTGTGGTAGAGCGGTAGTAGTGTTGAGGTGGCCCTCTACTGTGGTAGAGCGGTAGTAGTGTTGAGGTGGCCCTCTACTGTGGTAGAACGGTAGTAGTGTTGAGGTGGCCCTCTAACCATGTTCATCAGATGGCAgggatactgagagagag

Function

NR:

description
fukutin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU405824 False 336 lncRNA 0.52 2 804431 805222
TU405827 True 374 lncRNA 0.52 2 804431 805222

Neighbor

gene id symbol gene type direction distance location
LOC110523098 NA coding upstream 68640 733011 ~ 737553 (+)
LOC110524924 ptbp3 coding upstream 205152 482425 ~ 599279 (+)
LOC110523070 inip coding upstream 387897 410761 ~ 416534 (+)
LOC110524922 LOC106572882 coding upstream 491833 296626 ~ 312598 (+)
LOC110523064 LOC106572881 coding upstream 519298 224811 ~ 285133 (+)
LOC110523075 hook3 coding downstream 416441 1221663 ~ 1298618 (+)
LOC118964551 NA coding downstream 422395 1227617 ~ 1228033 (+)
LOC118964548 NA coding downstream 422865 1228087 ~ 1232244 (+)
LOC118964547 NA coding downstream 440779 1246001 ~ 1249676 (+)
LOC118964550 NA coding downstream 447603 1252825 ~ 1255902 (+)
G357498 NA non-coding upstream 8835 794229 ~ 795596 (+)
G357486 NA non-coding upstream 35647 762778 ~ 768784 (+)
G357475 NA non-coding upstream 84746 719112 ~ 719685 (+)
G357474 NA non-coding upstream 85461 717051 ~ 718970 (+)
G357502 NA non-coding downstream 17 805239 ~ 806038 (+)
G357508 NA non-coding downstream 7387 812609 ~ 863881 (+)
G357514 NA non-coding downstream 14243 819465 ~ 821862 (+)
G357520 NA non-coding downstream 27090 832312 ~ 833699 (+)
G357531 NA non-coding downstream 49810 855032 ~ 855451 (+)
G357136 NA other upstream 602789 200717 ~ 201642 (+)
G357564 NA other downstream 133846 939068 ~ 939873 (+)
G357565 NA other downstream 135013 940235 ~ 940741 (+)
G358042 NA other downstream 583173 1388395 ~ 1390468 (+)
G358076 NA other downstream 669573 1474795 ~ 1475734 (+)
LOC110523096 NA other downstream 1095141 1897358 ~ 1904914 (+)

Expression


Co-expression Network