G357508


Basic Information

Item Value
gene id G357508
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 812609 ~ 863881 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU405835
taagaatttgttcttaactgacttgcctagttaaataaaggtacaaataaaataaaaaaatagggaatagggctctggtctaaagtagtacactatatagggaatagggctctggtctaaagtagtacactatatagggaatagggctctggtctaaagtagtgcactatataggaaatagggctctggtctaaagtagtacactatatatagtacactactttacaccagagctgtcacaccctgaccatagtttgctttgtatgtttctatgttttggttggtcagggtgtgagctgggtgggcattc

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU405835 True 310 lncRNA 0.38 2 812609 863881

Neighbor

gene id symbol gene type direction distance location
LOC110523098 NA coding upstream 76818 733011 ~ 737553 (+)
LOC110524924 ptbp3 coding upstream 213330 482425 ~ 599279 (+)
LOC110523070 inip coding upstream 396075 410761 ~ 416534 (+)
LOC110524922 LOC106572882 coding upstream 500011 296626 ~ 312598 (+)
LOC110523064 LOC106572881 coding upstream 527476 224811 ~ 285133 (+)
LOC110523075 hook3 coding downstream 357782 1221663 ~ 1298618 (+)
LOC118964551 NA coding downstream 363736 1227617 ~ 1228033 (+)
LOC118964548 NA coding downstream 364206 1228087 ~ 1232244 (+)
LOC118964547 NA coding downstream 382120 1246001 ~ 1249676 (+)
LOC118964550 NA coding downstream 388944 1252825 ~ 1255902 (+)
G357502 NA non-coding upstream 6571 805239 ~ 806038 (+)
G357501 NA non-coding upstream 7387 804431 ~ 805222 (+)
G357498 NA non-coding upstream 17013 794229 ~ 795596 (+)
G357486 NA non-coding upstream 43825 762778 ~ 768784 (+)
G357541 NA non-coding downstream 16944 880825 ~ 887021 (+)
G357546 NA non-coding downstream 30350 894231 ~ 958257 (+)
G357554 NA non-coding downstream 46683 910564 ~ 1006885 (+)
G357568 mob3b non-coding downstream 104739 968620 ~ 970497 (+)
G357569 NA non-coding downstream 106745 970626 ~ 971152 (+)
G357136 NA other upstream 610967 200717 ~ 201642 (+)
G357564 NA other downstream 75187 939068 ~ 939873 (+)
G357565 NA other downstream 76354 940235 ~ 940741 (+)
G358042 NA other downstream 524514 1388395 ~ 1390468 (+)
G358076 NA other downstream 610914 1474795 ~ 1475734 (+)
LOC110523096 NA other downstream 1036482 1897358 ~ 1904914 (+)

Expression


Co-expression Network