G357797


Basic Information

Item Value
gene id G357797
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 817154 ~ 818747 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU406212
TTCTGTCACCTGGTGTCTGGACAATGCCTTTGAAATAATTCCATAAAACAACCAAGCGGGCGGCAGACCGCCAAGAAAACATATTTCATCATACGTAACAACATTCTTTAGATTTAGTTTTGAAATAATCATTTCACTTGACATAATTTAGTTGTCGTTGGTCTGAATGCTGAAGATGTCACATTGACCTTGATTATTGAGCCAGATTGATTAATTCATAAAGAAAATAACCCATCGTTTTCATGTATAATGGTCCAACTCTTTTCAATGTTTCATTATTTCATGTTCTTCTCTATTTTCCCATGCTGCTGTTCTGTGTTgggccctggggggggggggagaacgacATCCTGTTGTCTTCAAGTGGGACGACAAACTTTTTTTTTGAGTAACATTCACACTTCACATAAATATTTGTTTGATATTTGACGgtgacatcaatcaatcaatcaaatgtatttatgaagcctgACATGTCTAAGTGCTGTCCAGAAACCCTTTAGATATCTCCTCCTCTTTGTTGAACAGCAAATAAACTGT
>TU406214
CTGCGTGGTACTGCGTGATACTGCGTGGTACTCCGTGATACTGCGTGGTACTGCGTGATCCTGCTTCGTACTGCGTGATACTGCGTCGTACTGCGTGATACTGCGTCGTACTGCGTGATACTGCGTCGTACTGCGTGGTACTGTATGATAAGTAGTGCTGCTATTTATGCagccctttcttctcctcctatGTTCTGCCTGTTAGTTGTGGACCAGGCTCCCtctcaaatggcatcctgttcTCTTTGTACTGCACTACTTATAGGGAACAGGATGCGATTTGGGACGCTGTGAACCTGGACGTCACAGTGTGTTcttatccctgtctgtctgtctgtttgtctgtctgtggtgttcttatccctgtctgtctgtctgtctgtctgtctgtcgtgttcttatccctgtctgtctgtctgtctgtcgtgttcttatccctgtctgtctgtaaatgtAAATAGAGTACTGTCTTCTGTCACCTGGTGTCTGGACAATGCCTTTGAAATAATTCCATAAAACAACCAAGCGGGCGGCAGACCGCCAAGAAAACATATTTCATCATACGTAACAACATTCTTTAGATTTAGTTTTGAAATAATCATTTCACTTGACATAATTTAGTTGTCGTTGGTCTGAATGCTGAAGATGTCACATTGACCTTGATTATTGAGCCAGATTGATTAATTCATAAAGAAAATAACCCATCGTTTTCATGTATAATGGTCCAACTCTTTTCAATGTTTCATTATTTCATGTTCTTCTCTATTTTCCCATGCTGCTGTTCTGTGTTgggccctggggggggggggagaacgacATCCTGTTGTCTTCAAGTGGGACGACAAACTTTTTTTTTGAGTAACATTCACACTTCACATAAATATTTGTTTGATATTTGACGgtgacatcaatcaatcaatcaatcaaatgtatttatgaagtcgtcagctgatgtctcaaagtgctgtacggaaaccaaccaatcaaatgtatttatgaagtcgtcagctgatgtctcaaagtgctgtacggaaaccaaccaatcaaatgtatttatgaagcctgACATGTCAAAGTGCTGTCCAGAAAccaaccaatcaaatgtatttatgaagcctgACATGTCAAAGTGCTGTCCAGAAAccaaccaatcaaatgtatttatgaagcctgACATGTCAAAGTGCTGTCCAGAAAccaaccaatcaaatgtatttatgaagcctgacatgtcaaagtgctgtacggaaaccaaccaatcaaatgtatttatgaagcctgACATGTCTAAGTGCTGTCCAGAAACCCTTTAGATATCTCCTCCTCTTTGTTGAACAGCAAATAAACTGT
>TU406215
CTGCGTGGTACTGCGTGATACTGCGTGGTACTCCGTGATACTGCGTGGTACTGCGTGATCCTGCTTCGTACTGCGTGATACTGCGTCGTACTGCGTGATACTGCGTCGTACTGCGTGATACTGCGTCGTACTGCGTGGTACTGTATGATAAGTAGTGCTGCTATTTATGCagccctttcttctcctcctatGTTCTGCCTGTTAGTTGTGGACCAGGCTCCCtctcaaatggcatcctgttcTCTTTGTACTGCACTACTTATAGGGAACAGGATGCGATTTGGGACGCTGTGAACCTGGACGTCACAGTGTGTTcttatccctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtcgtgttcttatccctgtctgtctgtctgtctgtcgtgttcttatccctgtctgtctgtaaatgtAAATAGAGTACTGTCTTCTGTCACCTGGTGTCTGGACAATGCCTTTGAAATAATTCCATAAAACAACCAAGCGGGCGGCAGACCGCCAAGAAAACATATTTCATCATACGTAACAACATTCTTTAGATTTAGTTTTGAAATAATCATTTCACTTGACATAATTTAGTTGTCGTTGGTCTGAATGCTGAAGATGTCACATTGACCTTGATTATTGAGCCAGATTGATTAATTCATAAAGAAAATAACCCATCGTTTTCATGTATAATGGTCCAACTCTTTTCAATGTTTCATTATTTCATGTTCTTCTCTATTTTCCCATGCTGCTGTTCTGTGTTgggccctggggggggggggagaacgacATCCTGTTGTCTTCAAGTGGGACGACAAACTTTTTTTTTGAGTAACATTCACACTTCACATAAATATTTGTTTGATATTTGACGgtgacatcaatcaatcaatcaatcaaatgtatttatgaagtcgtcagctgatgtctcaaagtgctgtacggaaaccaaccaatcaaatgtatttatgaagtcgtcagctgatgtctcaaagtgctgtacggaaaccaaccaatcaaatgtatttatgaagcctgACATGTCAAAGTGCTGTCCAGAAAccaaccaatcaaatgtatttatgaagcctgACATGTCAAAGTGCTGTCCAGAAAccaaccaatcaaatgtatttatgaagcctgACATGTCAAAGTGCTGTCCAGAAAccaaccaatcaaatgtatttatgaagcctgacatgtcaaagtgctgtacggaaaccaaccaatcaaatgtatttatgaagcctgACATGTCTAAGTGCTGTCCAGAAACCCTTTAGATATCTCCTCCTCTTTGTTGAACAGCAAATAAACTGT
>TU406216
GCGTGGTCCTGCGTGATACTGCGTGGTACTGCGTGGTACTCCGTGATACTGCGTGGTACTGCGTGATACTGCGTGGTACTCCGTGATACTGCGTGGTACTGCGTGATCCTGCTTCGTACTGCGTGATACTGCGTCGTACTGCGTGATACTGCGTCGTACTGCGTGATACTGCGTCGTACTGCGTGGTACTGTATGATAAGTAGTGCTGCTATTTATGCagccctttcttctcctcctatGTTCTGCCTGTTAGTTGTGGACCAGGCTCCCtctcaaatggcatcctgttcTCTTTGTACTGCACTACTTATAGGGAACAGGATGCGATTTGGGACGtctgtctgtctgtctgtctgtctgtctgtctgtctgtcgtgttcttatccctgtctgtctgtctgtctgtcgtgttcttatccctgtctgtctgtaaatgtAAATAGAGTACTGTCTTCTGTCACCTGGTGTCTGGACAATGCCTTTGAAATAATTCCATAAAACAACCAAGCGGGCGGCAGACCGCCAAGAAAACATATTTCATCATACGTAACAACATTCTTTAGATTTAGTTTTGAAATAATCATTTCACTTGACATAATTTAGTTGTCGTTGGTCTGAATGCTGAAGATGTCACATTGACCTTGATTATTGAGCCAGATTGATTAATTCATAAAGAAAATAACCCATCGTTTTCATGTATAATGGTCCAACTCTTTTCAATGTTTCATTATTTCATGTTCTTCTCTATTTTCCCATGCTGCTGTTCTGTGTTgggccctggggggggggggagaacgacATCCTGTTGTCTTCAAGTGGGACGACAAACTTTTTTTTTGAGTAACATTCACACTTCACATAAATATTTGTTTGATATTTGACGgtgacatcaatcaatcaatcaatcaaatgtatttatgaagtcgtcagctgatgtctcaaagtgctgtacggaaaccaaccaatcaaatgtatttatgaagtcgtcagctgatgtctcaaagtgctgtacggaaaccaaccaatcaaatgtatttatgaagcctgACATGTCAAAGTGCTGTCCAGAAAccaaccaatcaaatgtatttatgaagcctgACATGTCAAAGTGCTGTCCAGAAAccaaccaatcaaatgtatttatgaagcctgACATGTCAAAGTGCTGTCCAGAAAccaaccaatcaaatgtatttatgaagcctgacatgtcaaagtgctgtacggaaaccaaccaatcaaatgtatttatgaagcctgACATGTCTAAGTGCTGTCCAGAAACCCTTTAGATATCTCCTCCTCTTTGTTGAACAGCAAATAAACTGT
>TU406217
CTGCGTGGTACTGCGTGATACTGCGTGGTACTCCGTGATACTGCGTGGTACTGCGTGATCCTGCTTCGTACTGCGTGATACTGCGTCGTACTGCGTGGTACTGCGTGGTACTGTATGATAAGTAGTGCTGCTATTTATGCagccctttcttctcctcctatGTTCTGCCTGTTAGTTGTGGACCAGGCTCCCtctcaaatggcatcctgttcTCTTTGTACTGCACTACTTATAGGGAACAGGATGCGATTTGGGACGCTGTGAACCTGGACGTCACAGTGTGTTcttatccctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtcgtgttcttatccctgtctgtctgtctgtctgtcgtgttcttatccctgtctgtctgtaaatgtAAATAGAGTACTGTCTTCTGTCACCTGGTGTCTGGACAATGCCTTTGAAATAATTCCATAAAACAACCAAGCGGGCGGCAGACCGCCAAGAAAACATATTTCATCATACGTAACAACATTCTTTAGATTTAGTTTTGAAATAATCATTTCACTTGACATAATTTAGTTGTCGTTGGTCTGAATGCTGAAGATGTCACATTGACCTTGATTATTGAGCCAGATTGATTAATTCATAAAGAAAATAACCCATCGTTTTCATGTATAATGGTCCAACTCTTTTCAATGTTTCATTATTTCATGTTCTTCTCTATTTTCCCATGCTGCTGTTCTGTGTTgggccctggggggggggggagaacgacATCCTGTTGTCTTCAAGTGGGACGACAAACTTTTTTTTTGAGTAACATTCACACTTCACATAAATATTTGTTTGATATTTGACGgtgacatcaatcaatcaatcaatcaaatgtatttatgaagtcgtcagctgatgtctcaaagtgctgtacggaaaccaaccaatcaaatgtatttatgaagtcgtcagctgatgtctcaaagtgctgtacggaaaccaaccaatcaaatgtatttatgaagcctgACATGTCAAAGTGCTGTCCAGAAAccaaccaatcaaatgtatttatgaagcctgACATGTCAAAGTGCTGTCCAGAAAccaaccaatcaaatgtatttatgaagcctgACATGTCAAAGTGCTGTCCAGAAAccaaccaatcaaatgtatttatgaagcctgacatgtcaaagtgctgtacggaaaccaaccaatcaaatgtatttatgaagcctgACATGTCTAAGTGCTGTCCAGAAACCCTTTAGATATCTCCTCCTCTTTGTTGAACAGCAAATAAACTGT
>TU406218
CTGCGTGGTACTGCGTGATACTGCGTGGTACTCCGTGATACTGCGTGGTACTGCGTGATCCTGCTTCGTACTGCGTGATACTGCGTCGTACTGCGTGATACTGCGTCGTACTGCGTGATACTGCGTCGTACTGCGTGGTACTGTATGATAAGTAGTGCTGCTATTTATGCagccctttcttctcctcctatGTTCTGCCTGTTAGTTGTGGACCAGGCTCCCtctcaaatggcatcctgttcTCTTTGTACTGCACTACTTATAGGGAACAGGATGCGATTTGGGACGCTGTGAACCTGGACGTCACAGTGTGTTcttatccctgtctgtctgtctgtttgtctgtctgtggtgttcttatccatgtctgtctgtctgtctgtctgtctgtctgtctgtctgtcgtgttcttatccatgtctgtctgtctgtctgtctgtctgtcgtgttcttatccctgtctgtctgtctgtctgtcgtgttcttatccctgtctgtctgtaaatgtAAATAGAGTACTGTCTTCTGTCACCTGGTGTCTGGACAATGCCTTTGAAATAATTCCATAAAACAACCAAGCGGGCGGCAGACCGCCAAGAAAACATATTTCATCATACGTAACAACATTCTTTAGATTTAGTTTTGAAATAATCATTTCACTTGACATAATTTAGTTGTCGTTGGTCTGAATGCTGAAGATGTCACATTGACCTTGATTATTGAGCCAGATTGATTAATTCATAAAGAAAATAACCCATCGTTTTCATGTATAATGGTCCAACTCTTTTCAATGTTTCATTATTTCATGTTCTTCTCTATTTTCCCATGCTGCTGTTCTGTGTTgggccctggggggggggggagaacgacATCCTGTTGTCTTCAAGTGGGACGACAAACTTTTTTTTTGAGTAACATTCACACTTCACATAAATATTTGTTTGATATTTGACGgtgacatcaatcaatcaatcaatcaaatgtatttatgaagtcgtcagctgatgtctcaaagtgctgtacggaaaccaaccaatcaaatgtatttatgaagtcgtcagctgatgtctcaaagtgctgtacggaaaccaaccaatcaaatgtatttatgaagcctgACATGTCAAAGTGCTGTCCAGAAAccaaccaatcaaatgtatttatgaagcctgACATGTCAAAGTGCTGTCCAGAAAccaaccaatcaaatgtatttatgaagcctgACATGTCAAAGTGCTGTCCAGAAAccaaccaatcaaatgtatttatgaagcctgacatgtcaaagtgctgtacggaaaccaaccaatcaaatgtatttatgaagcctgACATGTCTAAGTGCTGTCCAGAAACCCTTTAGATATCTCCTCCTCTTTGTTGAACAGCAAATAAACTGT
>TU406219
CTGCGTGGTACTGCGTGATACTGCGTGGTACTCCGTGATACTGCGTGGTACTGCGTGATCCTGCTTCGTACTGCGTGATACTGCGTCGTACTGCGTGATACTGCGTCGTACTGCGTGATACTGCGTCGTACTGCGTGGTACTGTATGATAAGTAGTGCTGCTATTTATGCagccctttcttctcctcctatGTTCTGCCTGTTAGTTGTGGACCAGGCTCCCtctcaaatggcatcctgttcTCTTTGTACTGCACTACTTATAGGGAACAGGATGCGATTTGGGACGCTGTGAACCTGGACGTCACAGTGTGTTcttatccctgtctgtctgtctgtctgtctgtctgtctgtctgtcgtgttcttatccctgtctgtctgtctgtctgtcgtgttcttatccctgtctgtctgtaaatgtAAATAGAGTACTGTCTTCTGTCACCTGGTGTCTGGACAATGCCTTTGAAATAATTCCATAAAACAACCAAGCGGGCGGCAGACCGCCAAGAAAACATATTTCATCATACGTAACAACATTCTTTAGATTTAGTTTTGAAATAATCATTTCACTTGACATAATTTAGTTGTCGTTGGTCTGAATGCTGAAGATGTCACATTGACCTTGATTATTGAGCCAGATTGATTAATTCATAAAGAAAATAACCCATCGTTTTCATGTATAATGGTCCAACTCTTTTCAATGTTTCATTATTTCATGTTCTTCTCTATTTTCCCATGCTGCTGTTCTGTGTTgggccctggggggggggggagaacgacATCCTGTTGTCTTCAAGTGGGACGACAAACTTTTTTTTTGAGTAACATTCACACTTCACATAAATATTTGTTTGATATTTGACGgtgacatcaatcaatcaatcaatcaaatgtatttatgaagtcgtcagctgatgtctcaaagtgctgtacggaaaccaaccaatcaaatgtatttatgaagtcgtcagctgatgtctcaaagtgctgtacggaaaccaaccaatcaaatgtatttatgaagcctgACATGTCAAAGTGCTGTCCAGAAAccaaccaatcaaatgtatttatgaagcctgACATGTCAAAGTGCTGTCCAGAAAccaaccaatcaaatgtatttatgaagcctgACATGTCAAAGTGCTGTCCAGAAAccaaccaatcaaatgtatttatgaagcctgacatgtcaaagtgctgtacggaaaccaaccaatcaaatgtatttatgaagcctgACATGTCTAAGTGCTGTCCAGAAACCCTTTAGATATCTCCTCCTCTTTGTTGAACAGCAAATAAACTGT
>TU406220
TTCTGTCACCTGGTGTCTGGACAATGCCTTTGAAATAATTCCATAAAACAACCAAGCGGGCGGCAGACCGCCAAGAAAACATATTTCATCATACGTAACAACATTCTTTAGATTTAGTTTTGAAATAATCATTTCACTTGACATAATTTAGTTGTCGTTGGTCTGAATGCTGAAGATGTCACATTGACCTTGATTATTGAGCCAGATTGATTAATTCATAAAGAAAATAACCCATCGTTTTCATGTATAATGGTCCAACTCTTTTCAATGTTTCATTATTTCATGTTCTTCTCTATTTTCCCATGCTGCTGTTCTGTGTTgggccctggggggggggggagaacgacATCCTGTTGTCTTCAAGTGGGACGACAAACTTTTTTTTTGAGTAACATTCACACTTCACATAAATATTTGTTTGATATTTGACGgtgacatcaatcaatcaatcaatcaaatgtatttatgaagtcgtcagctgatgtctcaaagtgctgtacggaaaccaaccaatcaaatgtatttatgaagtcgtcagctgatgtctcaaagtgctgtacggaaaccaaccaatcaaatgtatttatgaagcctgACATGTCAAAGTGCTGTCCAGAAAccaaccaatcaaatgtatttatgaagcctgACATGTCAAAGTGCTGTCCAGAAAccaaccaatcaaatgtatttatgaagcctgACATGTCAAAGTGCTGTCCAGAAAccaaccaatcaaatgtatttatgaagcctgacatGTCTAAGTGCTGTCCAGAAACCCTTTAGATATCTCCTCCTCTTTGTTGAACAGCAAATAAACTGT
>TU406221
CTGCGTGGTACTGCGTGATACTGCGTGGTACTCCGTGATACTGCGTGGTACTGCGTGATCCTGCTTCGTACTGCGTGATACTGCGTCGTACTGCGTGATACTGCGTCGTACTGCGTGATACTGCGTCGTACTGCGTGGTACTGTATGATAAGTAGTGCTGCTATTTATGCagccctttcttctcctcctatGTTCTGCCTGTTAGTTGTGGACCAGGCTCCCtctcaaatggcatcctgttcTCTTTGTACTGCACTACTTATAGGGAACAGGATGCGATTTGGGACGCTGTGAACCTGGACGTCACAGTGTGTTcttatccctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtcgtgttcttatccctgtctgtctgtctgtctgtcgtgttcttatccctgtctgtctgtaaatgtAAATAGAGTACTGTCTTCTGTCACCTGGTGTCTGGACAATGCCTTTGAAATAATTCCATAAAACAACCAAGCGGGCGGCAGACCGCCAAGAAAACATATTTCATCATACGTAACAACATTCTTTAGATTTAGTTTTGAAATAATCATTTCACTTGACATAATTTAGTTGTCGTTGGTCTGAATGCTGAAGATGTCACATTGACCTTGATTATTGAGCCAGATTGATTAATTCATAAAGAAAATAACCCATCGTTTTCATGTATAATGGTCCAACTCTTTTCAATGTTTCATTATTTCATGTTCTTCTCTATTTTCCCATGCTGCTGTTCTGTGTTgggccctggggggggggggagaacgacATCCTGTTGTCTTCAAGTGGGACGACAAACTTTTTTTTTGAGTAACATTCACACTTCACATAAATATTTGTTTGATATTTGACGgtgacatcaatcaatcaaatgtatttatgaagcctgacatgtcaaagtgctgtacggaaaccaaccaatcaaatgtatttatgaagcctgACATGTCTAAGTGCTGTCCAGAAACCCTTTAGATATCTCCTCCTCTTTGTTGAACAGCAAATAAACTGT

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU406212 False 540 lncRNA 0.37 2 817154 818033
TU406214 False 1350 TUCP 0.42 2 817154 818699
TU406215 False 1349 lncRNA 0.42 2 817154 818699
TU406216 False 1332 TUCP 0.42 2 817154 818747
TU406217 False 1291 TUCP 0.42 3 817154 818699
TU406218 False 1403 lncRNA 0.42 2 817154 818699
TU406219 False 1317 TUCP 0.42 2 817154 818699
TU406220 False 826 lncRNA 0.38 2 817154 818033
TU406221 True 1031 lncRNA 0.43 3 817154 818699

Neighbor

gene id symbol gene type direction distance location
fktn fktn coding downstream 7041 787758 ~ 810394 (-)
ythdc1 ythdc1 coding downstream 57772 724581 ~ 759382 (-)
LOC110523080 LOC106572757 coding downstream 100735 703311 ~ 716419 (-)
LOC110523078 LOC106572764 coding downstream 134603 636428 ~ 682551 (-)
LOC118964546 NA coding downstream 212045 603412 ~ 605109 (-)
LOC110523091 fsd1l coding upstream 2656 821355 ~ 910446 (-)
LOC110523076 LOC106572700 coding upstream 92736 911435 ~ 917121 (-)
LOC110523100 NA coding upstream 117646 936345 ~ 939419 (-)
LOC110523113 mob3b coding upstream 121500 940199 ~ 1004906 (-)
LOC110523114 thap1 coding upstream 194046 1012745 ~ 1015374 (-)
G357804 NA non-coding downstream 38217 774948 ~ 778937 (-)
G357810 NA non-coding downstream 84665 730895 ~ 732489 (-)
G357809 NA non-coding downstream 87618 729228 ~ 729536 (-)
G357808 NA non-coding downstream 88670 727608 ~ 728484 (-)
G357800 NA non-coding upstream 764 819463 ~ 820662 (-)
G357847 NA non-coding upstream 26219 844918 ~ 845402 (-)
G357850 NA non-coding upstream 36342 855041 ~ 855459 (-)
G357851 NA non-coding upstream 40246 858945 ~ 861868 (-)
G357871 NA non-coding upstream 95213 913912 ~ 914259 (-)
G357751 NA other downstream 125456 690811 ~ 691698 (-)
G357278 NA other downstream 572130 244749 ~ 245024 (-)
G357258 NA other downstream 607813 207105 ~ 209341 (-)
G357257 NA other downstream 623987 190519 ~ 193167 (-)
G358126 NA other upstream 476829 1295528 ~ 1298651 (-)
G358446 NA other upstream 1026125 1834553 ~ 1893316 (-)
G359712 NA other upstream 2255846 3074545 ~ 3080338 (-)
G359752 NA other upstream 2373814 3192513 ~ 3193105 (-)
G359989 NA other upstream 2806649 3625348 ~ 3625776 (-)

Expression


Co-expression Network