G357584



Basic Information


Item Value
gene id G357584
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 1007164 ~ 1007472 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU405927
AAATAGTTATGATCGGAATTACAAGGATAAACATAATACCATTTAACATCACCAAAGGGAAGGCATTGGGGGAAGATGGAGGATGATAGAGTCTGGCCAACATTTTCTCATCTTTCAAAcattgatctcaatacagttttcagtttcccaaaactagaatctgttacgaacagagtggactacGTTTTGTAGACTTATCATTCgccaaagttttttttaaatgtgcgtTGTTTAGCGGTTCAAGGGCGAATCGAGTTATTTCAcacgcacttcacagagtaggcgttccctaacggaaatatgcaaata

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU405927 True 309 lncRNA 0.38 1 1007164 1007472
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110523098 NA coding upstream 271373 733011 ~ 737553 (+)
LOC110524924 ptbp3 coding upstream 407885 482425 ~ 599279 (+)
LOC110523070 inip coding upstream 590630 410761 ~ 416534 (+)
LOC110524922 LOC106572882 coding upstream 694566 296626 ~ 312598 (+)
LOC110523064 LOC106572881 coding upstream 722031 224811 ~ 285133 (+)
LOC110523075 hook3 coding downstream 214191 1221663 ~ 1298618 (+)
LOC118964551 NA coding downstream 220145 1227617 ~ 1228033 (+)
LOC118964548 NA coding downstream 220615 1228087 ~ 1232244 (+)
LOC118964547 NA coding downstream 238529 1246001 ~ 1249676 (+)
LOC118964550 NA coding downstream 245353 1252825 ~ 1255902 (+)
G357554 NA non-coding upstream 279 910564 ~ 1006885 (+)
G357571 NA non-coding upstream 28678 973277 ~ 978486 (+)
G357569 NA non-coding upstream 36012 970626 ~ 971152 (+)
G357568 mob3b non-coding upstream 36667 968620 ~ 970497 (+)
G357546 NA non-coding upstream 48907 894231 ~ 958257 (+)
G357587 NA non-coding downstream 1868 1009340 ~ 1009768 (+)
G357566 NA non-coding downstream 5302 1012774 ~ 1013971 (+)
G357595 NA non-coding downstream 34346 1041818 ~ 1177985 (+)
G357625 NA non-coding downstream 146711 1154183 ~ 1154749 (+)
G357626 NA non-coding downstream 147724 1155196 ~ 1155574 (+)
G357565 NA other upstream 66423 940235 ~ 940741 (+)
G357564 NA other upstream 67291 939068 ~ 939873 (+)
G357136 NA other upstream 805522 200717 ~ 201642 (+)
G358042 NA other downstream 380923 1388395 ~ 1390468 (+)
G358076 NA other downstream 467323 1474795 ~ 1475734 (+)
LOC110523096 NA other downstream 892891 1897358 ~ 1904914 (+)
G358596 NA other downstream 1039202 2046674 ~ 2047025 (+)
G359084 NA other downstream 1609406 2616878 ~ 2617330 (+)

Expression


G357584 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.
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G357584 Expression in each Bioproject

Bar chart with 5 bars.
G357584 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 12.
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Co-expression Network