G357626


Basic Information

Item Value
gene id G357626
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 1155196 ~ 1155574 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU405995
ccccaagtccagaacagactatgggaggcgcacagtactacatagagacatggctacatggaactctattccacagtactacatagagccatgactacatggaactctattccacagtactacatagagacatggctacatgtaactctattccacagtactacatagagccatgactacatggaactctattccacagtactacatagagccatgactacatggaactctattccacagtactacatagagacatggctacatgtaactctattccacagtactacatagagccatgactacatggaactctattccacagtactacatagagccat

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU405995 True 338 lncRNA 0.43 2 1155196 1155574

Neighbor

gene id symbol gene type direction distance location
LOC110523098 NA coding upstream 419405 733011 ~ 737553 (+)
LOC110524924 ptbp3 coding upstream 555917 482425 ~ 599279 (+)
LOC110523070 inip coding upstream 738662 410761 ~ 416534 (+)
LOC110524922 LOC106572882 coding upstream 842598 296626 ~ 312598 (+)
LOC110523064 LOC106572881 coding upstream 870063 224811 ~ 285133 (+)
LOC110523075 hook3 coding downstream 66089 1221663 ~ 1298618 (+)
LOC118964551 NA coding downstream 72043 1227617 ~ 1228033 (+)
LOC118964548 NA coding downstream 72513 1228087 ~ 1232244 (+)
LOC118964547 NA coding downstream 90427 1246001 ~ 1249676 (+)
LOC118964550 NA coding downstream 97251 1252825 ~ 1255902 (+)
G357625 NA non-coding upstream 447 1154183 ~ 1154749 (+)
G357566 NA non-coding upstream 141225 1012774 ~ 1013971 (+)
G357587 NA non-coding upstream 145428 1009340 ~ 1009768 (+)
G357584 NA non-coding upstream 147724 1007164 ~ 1007472 (+)
G357571 NA non-coding upstream 176710 973277 ~ 978486 (+)
G357628 NA non-coding downstream 2911 1158485 ~ 1161157 (+)
G357630 NA non-coding downstream 7362 1162936 ~ 1163771 (+)
G357633 NA non-coding downstream 10780 1166354 ~ 1166683 (+)
G357973 NA non-coding downstream 27180 1182754 ~ 1183323 (+)
G357984 NA non-coding downstream 56841 1212415 ~ 1212672 (+)
G357565 NA other upstream 214455 940235 ~ 940741 (+)
G357564 NA other upstream 215323 939068 ~ 939873 (+)
G357136 NA other upstream 953554 200717 ~ 201642 (+)
G358042 NA other downstream 232821 1388395 ~ 1390468 (+)
G358076 NA other downstream 319221 1474795 ~ 1475734 (+)
LOC110523096 NA other downstream 744789 1897358 ~ 1904914 (+)
G358596 NA other downstream 891100 2046674 ~ 2047025 (+)
G359084 NA other downstream 1461304 2616878 ~ 2617330 (+)

Expression


Co-expression Network