G357630


Basic Information

Item Value
gene id G357630
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 1162936 ~ 1163771 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU405999
ctgactggctggctgactggctgactgactggctgactggctggctgactggctgactggctgactggctgactggctggctgactgactggctgactggctggctgactgactggctgactggctgactggctgactgactggctggctgactgactgactgactggctgactggctggctgactggctgactggctgactggctgactgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU405999 True 212 lncRNA 0.62 2 1162936 1163771

Neighbor

gene id symbol gene type direction distance location
LOC110523098 NA coding upstream 427145 733011 ~ 737553 (+)
LOC110524924 ptbp3 coding upstream 563657 482425 ~ 599279 (+)
LOC110523070 inip coding upstream 746402 410761 ~ 416534 (+)
LOC110524922 LOC106572882 coding upstream 850338 296626 ~ 312598 (+)
LOC110523064 LOC106572881 coding upstream 877803 224811 ~ 285133 (+)
LOC110523075 hook3 coding downstream 57892 1221663 ~ 1298618 (+)
LOC118964551 NA coding downstream 63846 1227617 ~ 1228033 (+)
LOC118964548 NA coding downstream 64316 1228087 ~ 1232244 (+)
LOC118964547 NA coding downstream 82230 1246001 ~ 1249676 (+)
LOC118964550 NA coding downstream 89054 1252825 ~ 1255902 (+)
G357628 NA non-coding upstream 1779 1158485 ~ 1161157 (+)
G357626 NA non-coding upstream 7362 1155196 ~ 1155574 (+)
G357625 NA non-coding upstream 8187 1154183 ~ 1154749 (+)
G357566 NA non-coding upstream 148965 1012774 ~ 1013971 (+)
G357587 NA non-coding upstream 153168 1009340 ~ 1009768 (+)
G357633 NA non-coding downstream 2583 1166354 ~ 1166683 (+)
G357973 NA non-coding downstream 18983 1182754 ~ 1183323 (+)
G357984 NA non-coding downstream 48644 1212415 ~ 1212672 (+)
G357986 NA non-coding downstream 50250 1214021 ~ 1214494 (+)
G357999 NA non-coding downstream 70917 1234688 ~ 1235117 (+)
G357565 NA other upstream 222195 940235 ~ 940741 (+)
G357564 NA other upstream 223063 939068 ~ 939873 (+)
G357136 NA other upstream 961294 200717 ~ 201642 (+)
G358042 NA other downstream 224624 1388395 ~ 1390468 (+)
G358076 NA other downstream 311024 1474795 ~ 1475734 (+)
LOC110523096 NA other downstream 736592 1897358 ~ 1904914 (+)
G358596 NA other downstream 882903 2046674 ~ 2047025 (+)
G359084 NA other downstream 1453107 2616878 ~ 2617330 (+)

Expression


Co-expression Network