G357633


Basic Information

Item Value
gene id G357633
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 1166354 ~ 1166683 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU406002
TACCAACTGGTCATATTTCCAACTACCAACTGGTCATATTTCCAACTTACCAACTGGTCATATTTCCAACTACCAACTGGTCATATTTCCAACTAGCAACTGGTCATATTTCCAACTACCAACTGGTCATATTTCCAACTACCAACTGGTCATATTTCCAACTACCAACTGGTCATATTTCCAACTACCAACTGGTCATATTTCCAACTACCAACTGGTCATATTTCCAACTACCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU406002 True 238 lncRNA 0.39 2 1166354 1166683

Neighbor

gene id symbol gene type direction distance location
LOC110523098 NA coding upstream 430563 733011 ~ 737553 (+)
LOC110524924 ptbp3 coding upstream 567075 482425 ~ 599279 (+)
LOC110523070 inip coding upstream 749820 410761 ~ 416534 (+)
LOC110524922 LOC106572882 coding upstream 853756 296626 ~ 312598 (+)
LOC110523064 LOC106572881 coding upstream 881221 224811 ~ 285133 (+)
LOC110523075 hook3 coding downstream 54980 1221663 ~ 1298618 (+)
LOC118964551 NA coding downstream 60934 1227617 ~ 1228033 (+)
LOC118964548 NA coding downstream 61404 1228087 ~ 1232244 (+)
LOC118964547 NA coding downstream 79318 1246001 ~ 1249676 (+)
LOC118964550 NA coding downstream 86142 1252825 ~ 1255902 (+)
G357630 NA non-coding upstream 2583 1162936 ~ 1163771 (+)
G357628 NA non-coding upstream 5197 1158485 ~ 1161157 (+)
G357626 NA non-coding upstream 10780 1155196 ~ 1155574 (+)
G357625 NA non-coding upstream 11605 1154183 ~ 1154749 (+)
G357566 NA non-coding upstream 152383 1012774 ~ 1013971 (+)
G357973 NA non-coding downstream 16071 1182754 ~ 1183323 (+)
G357984 NA non-coding downstream 45732 1212415 ~ 1212672 (+)
G357986 NA non-coding downstream 47338 1214021 ~ 1214494 (+)
G357999 NA non-coding downstream 68005 1234688 ~ 1235117 (+)
G358003 NA non-coding downstream 97691 1264374 ~ 1264818 (+)
G357565 NA other upstream 225613 940235 ~ 940741 (+)
G357564 NA other upstream 226481 939068 ~ 939873 (+)
G357136 NA other upstream 964712 200717 ~ 201642 (+)
G358042 NA other downstream 221712 1388395 ~ 1390468 (+)
G358076 NA other downstream 308112 1474795 ~ 1475734 (+)
LOC110523096 NA other downstream 733680 1897358 ~ 1904914 (+)
G358596 NA other downstream 879991 2046674 ~ 2047025 (+)
G359084 NA other downstream 1450195 2616878 ~ 2617330 (+)

Expression


Co-expression Network