G357973


Basic Information

Item Value
gene id G357973
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 1182754 ~ 1183323 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU406456
aagaagcccaagcctctgctaaatgacctactgtatattataacagcagggaagaagcccaagcctctgctaaatgacctactgtatattataacagtagggaagaagcccaagcctctgctaaatgacctactgtatattataacagcagggaagaagcccaagcctctgctaaatgacctactgtatattataacagcagggaagaagcctctgctaaatgacctactgtatattataacagcagggaagaagcctctgctaaatgacctactgtatattataacagcagggaagaagcctctgctaaatgacctactgtatattataacagcagggaagaagcccaaccctctgctaaatgacctactgtatattataacagcagggaagaagcccaagcctctgctaaatgacctactgtatattataacagcagggaagaagcctctgctaaatgacctactgtatattataacagcagggaagaagcccaagcctctgctaaatgacctactgtatattataacagcagggaagaagcctctgctaaatgacctactgtatatt

Function

NR:

description
PREDICTED: uncharacterized protein LOC106580705

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU406456 True 570 lncRNA 0.42 1 1182754 1183323

Neighbor

gene id symbol gene type direction distance location
LOC110523098 NA coding upstream 446963 733011 ~ 737553 (+)
LOC110524924 ptbp3 coding upstream 583475 482425 ~ 599279 (+)
LOC110523070 inip coding upstream 766220 410761 ~ 416534 (+)
LOC110524922 LOC106572882 coding upstream 870156 296626 ~ 312598 (+)
LOC110523064 LOC106572881 coding upstream 897621 224811 ~ 285133 (+)
LOC110523075 hook3 coding downstream 38340 1221663 ~ 1298618 (+)
LOC118964551 NA coding downstream 44294 1227617 ~ 1228033 (+)
LOC118964548 NA coding downstream 44764 1228087 ~ 1232244 (+)
LOC118964547 NA coding downstream 62678 1246001 ~ 1249676 (+)
LOC118964550 NA coding downstream 69502 1252825 ~ 1255902 (+)
G357595 NA non-coding upstream 4769 1041818 ~ 1177985 (+)
G357633 NA non-coding upstream 16071 1166354 ~ 1166683 (+)
G357630 NA non-coding upstream 18983 1162936 ~ 1163771 (+)
G357628 NA non-coding upstream 21597 1158485 ~ 1161157 (+)
G357626 NA non-coding upstream 27180 1155196 ~ 1155574 (+)
G357984 NA non-coding downstream 29092 1212415 ~ 1212672 (+)
G357986 NA non-coding downstream 30698 1214021 ~ 1214494 (+)
G357999 NA non-coding downstream 51365 1234688 ~ 1235117 (+)
G358003 NA non-coding downstream 81051 1264374 ~ 1264818 (+)
G357995 NA non-coding downstream 93647 1276970 ~ 1277414 (+)
G357565 NA other upstream 242013 940235 ~ 940741 (+)
G357564 NA other upstream 242881 939068 ~ 939873 (+)
G357136 NA other upstream 981112 200717 ~ 201642 (+)
G358042 NA other downstream 205072 1388395 ~ 1390468 (+)
G358076 NA other downstream 291472 1474795 ~ 1475734 (+)
LOC110523096 NA other downstream 717040 1897358 ~ 1904914 (+)
G358596 NA other downstream 863351 2046674 ~ 2047025 (+)
G359084 NA other downstream 1433555 2616878 ~ 2617330 (+)

Expression


Co-expression Network