G358103


Basic Information

Item Value
gene id G358103
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 1246588 ~ 1250565 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU406618
ACGGGACAGGAAAATGGGACAGGAGAACGGGACAGGAGAACGGGACAGGAGAACGGGACAGGAGAACGGGACAGGAGAACGGGACAGGAGAACGGAACAGTAGAACGGGACAGGAGAAAAGAACGGGATAGGAGAACAGAACGGGACAGgacaatagaacaggacaggaggacaggacaggagaatagaacaggacaggataatagaacaggacaggaggacaggacaggagaatagaacaggacaggaggacaggacaggagaatagaacaggacaggataatagaacaggacaggaggacaggacaggagaatagaacaggacaggaggacaggacaggagaatagaacaggacaggataatagaacaggacaggaggacaggacaggagaatagaacaggacaggataatagaacaggacaggaggacaggacaggagaatagaacaggacaggagaatagaacaggacaggagaatagaacaggacaggagaatagaacaggacaggacagagaatagaacaggacaggagattagaacaggacaggagaatagaacaggacaggacaggagaataGAACAGGACCATGTTATCAAatagaagagagaacagacatAGTGAACACAGTACTCGGTTCTAGAATACCAGAATGAAGAAAACCTGGATGCCATTTGGTTTTAGTGGAAGGAGCCTAAATGGAATGCCGTCCTACCACGATTAAGGGCACTGTCACCAAGAAGTCTTCATGGGTCCAACAGACTCCAAATTCGGGTCCTAAAAATCTGACTTTTGTCTCAGATCTGGGTTGGGTCTGATATAATTGCCAAGGGTCTCGGGtatgtgtaaaaaataaaaatggtattTACCGACCAGACCCGTCGTCTGTTCATTTAATTTAATGTGCGTGACGTGGTGAGAACTGCGTGAGCTTGTTATCTGTGTCAGCCAACTCAATAAAACGTATAGCTTATGTGTCCTGCTGAAAGCGGTTCTGGCTGCTCACCTCACGTACAGCtgctgctgaggagagagagtgaaaggagtcTTGACCTAGGCTACTGTTGACTGGGAAGATGGAGGCCTTTTTCATTGACGTAAAACATCAATTAGAGAAGAAAGAGGACAGTGAAAAGAAGCCGACAAGCGGAATGTCCTCGGGGACAAACGTTTTAATATGGTGGTGGACAAACGAGATGAACGTTGGCCAATGAACGGTGGCCAATGAACGGTGGCCAATGAACGTGTGCAGCTTGTGTTTGGAGGTTTGACGCAATAGTATTTATTATAATTTGTtttaatcattattattattattgtatatcATTATTACTATTTTATGCCTATTTAAGAATCTAGGAACCGTTTTTTAAACAAGTTCTTTATTAAAATATGCaacaaatgtttttgtttcattCTGTTGAGTTATTTTCTTCTTTGGGCCAAATGAAGTTTAGACTGTAATGCTGTGTTTGATGTTTTTAAGGACGAGTAACTGTGGACCATTTGGCCAATGGTGTTCCTATATCGATGGTGCTGGCAGGACCCAGTCGGAGGtgactttctctccctctttctactctCAGGTCTGAACCGGTCTGAACTGGTCTGAACCGGTCTGAACTGGTCTGAACTGGTCTGAACCGGTCTGTTTGGTTCTGTTTTTCCACAGGCCTTTACGGAACGGGTCTCAAGGTCCATTCGGAAACGCGTCTCCAtttaaagataaataaataatgtatttatgcATATCGGGATCAGGTGGGAAAGACACAGATTTATTTCAGGAACGAACGGGTCCAACTATTTTAGACCAGTGAAGACCTTAACCGTTAACTTTTACCCCTGGTATTCATATGGAGGTTTTAACCATTGTACTGAGGATATTTATTCCAACAACCATTATAACAAAGGTTTGACTTACTTTCAACTATAGGACACCATCGTAAACCCATGACCTTCTACTACGGCTGTACAGTATCTAATTGAAGTCAGAGACAACATTGTTGTGAACCCATGACCTTCTACTACGGCTGTACAGTATCTAGTTGAAGGCAGAGACAACATTGTTGTGAACCCATGACCTTCTACTACGGCTGTACAGTATCTAATTGAAGTCAGAGACAACATTGTTGTGAACCCATGACCTTCTACTACGGCTGTACAGTATCTAGTTGAAGGCAGAGACAACATTGTCGTGAACCCATGACCTTCTACTACGGCTGTACAGTATCTAGTTGAAGGCAGAGACAACATTGTCGTGAACCCATGACCTTCTACTACGGCTGTACAGTATCTAGTTGAAGGCAGAGACAACATTGTCGTGAACCCATGACCTTCTACTACGGCTGTACAGTATCTAGTTGAAGGCAGAGACAACATTGTTGTGAACCCATGACCTTCTACTACGGCTGTACAGTAACTAGTTGAAGACAGAGACAACATTGTTGTGAACCCATGACCTTCTACTACGGCTGTACAGTATCTAGTTGAAGGCAGAGACAACATTGTTGTGAACCCATGACCTTCTACTACGGCTGTACAGTATCTAGTTGAAGGCAGAGACAACATTGTTGTGAACCCATGACCTTCTACTACGGCTGTACAGTATCTAGTTGAAGGCAGAGACAACATTGTCGTGAACCCATGACCTTCTACTACGGCTGTACAGTATCTAGTTGAAGTCAGAGACAACACTGTCGTGAACCCATGACCTTCTACTACGGCTGTACAGTATCTAGTTGAAGGCAGAGACAACATTGTTGTGAACCCATGACCTTCTACTACGGCTGTACAGTATCTAGTTGAAGGCAGAGACAACATTGTCGTGAACCCATGACCTTCTACTACGGCTGTACAGTATCTAGTTGAAGTCAGAGACAACACTGTCGTGAACCCATGACCTTCTACTACGGCTGTACAGTATCTAGTTGAAGGCAGAGACAACATTGTTGTGAACCCATGACCTTCTACTACGGCTGTACAGTATCTAGTTGAAGGCAGAGACAACATTGTTGTGAACCCATGACCTTCTACTACGGCTGTACAGTATCTAGTTGAAGGCAGAGACAACATTGTTGTGAACCCATGACCTTCTACTACGGCTGTACAGTATCTAGCTGAAGGCAGAGACAACATTGTTGTGAACCCATGACCTTCTACTACGGCTGTACAGTATCTAGTTGAAGGCAGAGACAACATTGTTGTGAACCCATGACCTTCTACTACGGCTGTACAGTATCTAATTGAAGTCAGAGACAACATTGTTGTGAACCCATGACCTTCTACTACGGCTGTACAGTATCTAGTTGAAGGCAGAGACAACATTGTTGTGAACCCATGACCTTCTACTACGGCTGTACAGTATCTAGTTG

Function

NR:

description
PREDICTED: keratin-associated protein 5-4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU406618 True 3375 lncRNA 0.44 6 1246588 1250565

Neighbor

gene id symbol gene type direction distance location
LOC110523084 rnf170 coding downstream 24894 1214832 ~ 1221694 (-)
LOC118964538 NA coding downstream 118970 1090907 ~ 1127618 (-)
LOC110523115 LOC106572830 coding downstream 195510 1036859 ~ 1051078 (-)
LOC110523114 thap1 coding downstream 231214 1012745 ~ 1015374 (-)
LOC110523113 mob3b coding downstream 241682 940199 ~ 1004906 (-)
LOC110517810 trabd2a coding upstream 85102 1335667 ~ 1475700 (-)
LOC110523086 LOC106572646 coding upstream 658384 1908949 ~ 1910347 (-)
LOC118964539 NA coding upstream 758569 2009134 ~ 2060858 (-)
rassf6 LOC106572546 coding upstream 1906118 3154684 ~ 3185209 (-)
lpar1 LOC106572527 coding upstream 2141602 3392167 ~ 3453780 (-)
G358099 NA non-coding downstream 11397 1234685 ~ 1235191 (-)
G358098 NA non-coding downstream 11993 1234247 ~ 1234595 (-)
G358097 NA non-coding downstream 14985 1227905 ~ 1231603 (-)
G358079 NA non-coding downstream 32833 1212413 ~ 1213755 (-)
G358091 NA non-coding downstream 39244 1207119 ~ 1207344 (-)
G358106 NA non-coding upstream 3315 1253880 ~ 1255879 (-)
G358123 NA non-coding upstream 34359 1284924 ~ 1285607 (-)
G358127 NA non-coding upstream 36448 1287013 ~ 1288234 (-)
G358124 NA non-coding upstream 48952 1299517 ~ 1302598 (-)
G358129 NA non-coding upstream 54457 1305022 ~ 1308006 (-)
G357797 NA other downstream 427841 817154 ~ 818747 (-)
ythdc1 ythdc1 other downstream 510020 724581 ~ 759382 (-)
G357751 NA other downstream 554890 690811 ~ 691698 (-)
G357278 NA other downstream 1001564 244749 ~ 245024 (-)
G357258 NA other downstream 1037247 207105 ~ 209341 (-)
G358126 NA other upstream 44963 1295528 ~ 1298651 (-)
G358446 NA other upstream 594259 1834553 ~ 1893316 (-)
G359712 NA other upstream 1823980 3074545 ~ 3080338 (-)
G359752 NA other upstream 1941948 3192513 ~ 3193105 (-)
G359989 NA other upstream 2374783 3625348 ~ 3625776 (-)

Expression


Co-expression Network