G358016


Basic Information

Item Value
gene id G358016
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 1313748 ~ 1314018 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU406512
ccagtctccaccagaaacacaggtctccagtctccaccagaaacaccagtctccaacAGAAATACAGGTCtccagtctccaccagaaacaccagtctccaccagaaacaccagtctcaacctgaaacaccagtctccacctgaaacaccagtctccacctgaaacaccagtctccaccagaaacaccagtctccaccagaaacaccagtctccaccagaaacaccagtctccaccaaaaacaccagtctccaccagaaacaccagtctcca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU406512 True 271 lncRNA 0.52 1 1313748 1314018

Neighbor

gene id symbol gene type direction distance location
LOC110523075 hook3 coding upstream 16266 1221663 ~ 1298618 (+)
LOC118964550 NA coding upstream 57846 1252825 ~ 1255902 (+)
LOC118964547 NA coding upstream 64072 1246001 ~ 1249676 (+)
LOC118964548 NA coding upstream 81504 1228087 ~ 1232244 (+)
LOC118964551 NA coding upstream 85715 1227617 ~ 1228033 (+)
LOC110523072 LOC106572640 coding downstream 395525 1709543 ~ 1828943 (+)
LOC110523096 NA coding downstream 583340 1897358 ~ 1904914 (+)
LOC110523104 LOC106572580 coding downstream 1152113 2466131 ~ 2494292 (+)
LOC118964552 cntfr coding downstream 1341680 2655698 ~ 3017288 (+)
LOC110524930 LOC106572564 coding downstream 1718831 3032849 ~ 3107239 (+)
G358014 NA non-coding upstream 3919 1309609 ~ 1309829 (+)
G357995 NA non-coding upstream 36334 1276970 ~ 1277414 (+)
G358003 NA non-coding upstream 48930 1264374 ~ 1264818 (+)
G357999 NA non-coding upstream 78631 1234688 ~ 1235117 (+)
G358020 NA non-coding downstream 15549 1329567 ~ 1336801 (+)
G358023 NA non-coding downstream 22969 1336987 ~ 1342784 (+)
G358034 NA non-coding downstream 49527 1363545 ~ 1367597 (+)
G358074 NA non-coding downstream 154337 1468355 ~ 1469054 (+)
G358215 NA non-coding downstream 194094 1508112 ~ 1508792 (+)
G357565 NA other upstream 373007 940235 ~ 940741 (+)
G357564 NA other upstream 373875 939068 ~ 939873 (+)
LOC110523070 inip other upstream 897219 410761 ~ 416534 (+)
G357136 NA other upstream 1112106 200717 ~ 201642 (+)
G358042 NA other downstream 74377 1388395 ~ 1390468 (+)
G358076 NA other downstream 160777 1474795 ~ 1475734 (+)
G358596 NA other downstream 732656 2046674 ~ 2047025 (+)
G359084 NA other downstream 1302860 2616878 ~ 2617330 (+)

Expression


Co-expression Network