Gene
RNA
| Item | Value |
|---|---|
| gene id | G358139 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 1326598 ~ 1326964 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC105419847, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU406669 | True | 283 | lncRNA | 0.34 | 2 | 1326598 | 1326964 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523084 | rnf170 | coding | downstream | 104904 | 1214832 ~ 1221694 (-) |
| LOC118964538 | NA | coding | downstream | 198980 | 1090907 ~ 1127618 (-) |
| LOC110523115 | LOC106572830 | coding | downstream | 275520 | 1036859 ~ 1051078 (-) |
| LOC110523114 | thap1 | coding | downstream | 311224 | 1012745 ~ 1015374 (-) |
| LOC110523113 | mob3b | coding | downstream | 321692 | 940199 ~ 1004906 (-) |
| LOC110517810 | trabd2a | coding | upstream | 8703 | 1335667 ~ 1475700 (-) |
| LOC110523086 | LOC106572646 | coding | upstream | 581985 | 1908949 ~ 1910347 (-) |
| LOC118964539 | NA | coding | upstream | 682170 | 2009134 ~ 2060858 (-) |
| rassf6 | LOC106572546 | coding | upstream | 1829719 | 3154684 ~ 3185209 (-) |
| lpar1 | LOC106572527 | coding | upstream | 2065203 | 3392167 ~ 3453780 (-) |
| G358138 | NA | non-coding | downstream | 353 | 1325830 ~ 1326245 (-) |
| G358137 | NA | non-coding | downstream | 3832 | 1322452 ~ 1322766 (-) |
| G358133 | NA | non-coding | downstream | 11545 | 1314836 ~ 1315053 (-) |
| G358129 | NA | non-coding | downstream | 18592 | 1305022 ~ 1308006 (-) |
| G358124 | NA | non-coding | downstream | 24000 | 1299517 ~ 1302598 (-) |
| G358141 | NA | non-coding | upstream | 1299 | 1328263 ~ 1328506 (-) |
| G358147 | NA | non-coding | upstream | 10326 | 1337290 ~ 1340353 (-) |
| G358170 | NA | non-coding | upstream | 61362 | 1388326 ~ 1390886 (-) |
| G358248 | NA | non-coding | upstream | 236909 | 1563873 ~ 1568403 (-) |
| G358249 | NA | non-coding | upstream | 238856 | 1565820 ~ 1595934 (-) |
| G358126 | NA | other | downstream | 27947 | 1295528 ~ 1298651 (-) |
| G357797 | NA | other | downstream | 507851 | 817154 ~ 818747 (-) |
| ythdc1 | ythdc1 | other | downstream | 590030 | 724581 ~ 759382 (-) |
| G357751 | NA | other | downstream | 634900 | 690811 ~ 691698 (-) |
| G357278 | NA | other | downstream | 1081574 | 244749 ~ 245024 (-) |
| G358446 | NA | other | upstream | 517860 | 1834553 ~ 1893316 (-) |
| G359712 | NA | other | upstream | 1747581 | 3074545 ~ 3080338 (-) |
| G359752 | NA | other | upstream | 1865549 | 3192513 ~ 3193105 (-) |
| G359989 | NA | other | upstream | 2298384 | 3625348 ~ 3625776 (-) |
| G360015 | NA | other | upstream | 2387268 | 3714232 ~ 3715552 (-) |
