G358023


Basic Information

Item Value
gene id G358023
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 1336987 ~ 1342784 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU406522
agTTATTTGCCCAGTCAGATAATGAGCAGTTATtcacccagtcagatatagaggagttatttacccagtcagaggagttattaacccagtcagatatagaggagttattaacccagtcagatatagaggagttatttacccagtcagatatagaggagttattaacccagtcagatatagaggagttatttacccagtcagatgggttattaacccagtcagatgggttattaacccagtcagatatagaggagttattaacccagtcagatatagaggagttatttacccagtcagatgggttattaacccagtcagataTAGAggggttattaacccagtcagatatagaggggttatttacccagtcagatatagaggagttatttacccagtcagatatagaggagttatttacccagtcagatatagaggagttatttacccagtcagatatagaggagttatttacctagtcagatatagaggagttatttacccagtcaaatatagaggagttattaacccagtcagatatagaggagttattaacccagtcagaggagtgatttacccagtcagatatagaggggttatttacccagtcagatatagaggagttatttacccagtaagatatagaggagttatttacccagtcagatatagaggagttattaacccagtcagatatagaggggttatttacccagtcagatatagaggggttatttacccagtcagatatagaggagttatttacccagtcagatatagaggagttttttgcccagtcagatatagaggagttattaacccagtcagatatagaggagttattaacccagtcagatatagaggagttattaacccagtcagatatagaggagttattaacccagtcagatatagaggagttattaacccagtcagatatagaggagttatttacccagtcagatatagaggagttatttacccagtcagagtagttattaacccagtcagatatagagaagttattaacccagtcagaggagttattaacccagtcagatatagaggaggtattaacccagtcagaggagttattaacccagtcagatatagaggagttatttacccagtcagaggagttatttacccagtcagatatagaggagttatttacccagtcagatatagaggagttatttacccagtcagatatagaggagttattaacccagtcagatatagaggagttatttacccagtcagaggagttattaacccagtcagatatagaggagttatttacccagtcaaaTATAGAGGAGTtgttaacccagtcagatatagagaagttattaacccagtcagaggagttattaacccagtcagatatagaggagttattaacccagtcagaggagttattaacccagtcagatatggaggagttattaacccagtcagatatagaggagttatttacccagtcagatatagaggagttatttacccagtcagaggagttattccccagtcagatatagaggagttatttacccagtcagatatagaggagttatttacccagtcagaggagttattaacccagtcagatatagaggagttattaacccagtcagatatagaggagttatttacccagtcagatatagaggagttattaacccagtcagaggagttatttacccagtcagatatagaggagttattaacccagtcagaggagttatttacccagtcagatatagagaagttattaacccagtcagatatagaggagttatttacccagtcagatatagaggagttatttacccagtcagatatagaggagttattaacccagtcagatatagaggagttattaacccagtcagaggagttatttacccagtcagatatagagaagttattaacccagtcagatatagaggagttattaacccagtcagaggagttatttacccagtcagatatagaggagttattaacccagtcagatatagaggagtcaAACATTGATACTGTTCCTAATTTTAACTGTCGTTACATAATGAGGTCAAACATTGATACTGTTGCTAGTTTAGCTGCTAATGCTACATGACGATGTCAAACAGAGAATTCCAGAACCTTAGAACCTAGTTTGTCAGAACTCTGGAAATCATCAGCCTGATCAGGATGAATCCAGAAACATGCCAGTCTCTTTGATGTACGCCTGTTAGATCCAGGAACTAAAGTCCGGGCTTATTGGGACTCTGCCAATCACAACAAACGGACAGGTTCCTCCGCCTGCCACTATTGGTAGAGAGAAACGCAGCTCTGTAACTACCTCC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106572272

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU406522 True 2348 lncRNA 0.39 5 1336987 1342784

Neighbor

gene id symbol gene type direction distance location
LOC110523075 hook3 coding upstream 39505 1221663 ~ 1298618 (+)
LOC118964550 NA coding upstream 81085 1252825 ~ 1255902 (+)
LOC118964547 NA coding upstream 87311 1246001 ~ 1249676 (+)
LOC118964548 NA coding upstream 104743 1228087 ~ 1232244 (+)
LOC118964551 NA coding upstream 108954 1227617 ~ 1228033 (+)
LOC110523072 LOC106572640 coding downstream 366759 1709543 ~ 1828943 (+)
LOC110523096 NA coding downstream 554574 1897358 ~ 1904914 (+)
LOC110523104 LOC106572580 coding downstream 1123347 2466131 ~ 2494292 (+)
LOC118964552 cntfr coding downstream 1312914 2655698 ~ 3017288 (+)
LOC110524930 LOC106572564 coding downstream 1690065 3032849 ~ 3107239 (+)
G358020 NA non-coding upstream 186 1329567 ~ 1336801 (+)
G358016 NA non-coding upstream 22969 1313748 ~ 1314018 (+)
G358014 NA non-coding upstream 27158 1309609 ~ 1309829 (+)
G357995 NA non-coding upstream 59573 1276970 ~ 1277414 (+)
G358034 NA non-coding downstream 20761 1363545 ~ 1367597 (+)
G358074 NA non-coding downstream 125571 1468355 ~ 1469054 (+)
G358215 NA non-coding downstream 165328 1508112 ~ 1508792 (+)
G358230 NA non-coding downstream 217297 1560081 ~ 1598425 (+)
G358282 NA non-coding downstream 355300 1698084 ~ 1698302 (+)
G357565 NA other upstream 396246 940235 ~ 940741 (+)
G357564 NA other upstream 397114 939068 ~ 939873 (+)
LOC110523070 inip other upstream 920458 410761 ~ 416534 (+)
G357136 NA other upstream 1135345 200717 ~ 201642 (+)
G358042 NA other downstream 45611 1388395 ~ 1390468 (+)
G358076 NA other downstream 132011 1474795 ~ 1475734 (+)
G358596 NA other downstream 703890 2046674 ~ 2047025 (+)
G359084 NA other downstream 1274094 2616878 ~ 2617330 (+)

Expression


Co-expression Network