G358215


Basic Information

Item Value
gene id G358215
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 1508112 ~ 1508792 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU406757
cagaaacccagcctaaaacccccaacagcaagcaatgcaggtgaagaagcacggtggctaggaaaaactccctagaaaggccaaaacctaggaagaaacctagagaggaaccaggctatgtggggtggccagtcctcttctggctgtgccggatggagattataacaaaacatggtcaagatgttcaaatgttcataaatgaccagcatggtcgaataataataaggcagaatagttgaaactggagcagcagcacagtcaggtggactggggacagcaaggagtcatcatgtcaggtattcctggggcatggtcctagggctcaggtcctccgagagagagaaagaaagagagaattagagagagagcatatgtgggatggccagtcctcttctggctgtgccgggtggagattataacagaacatggccaagatgttcaaatgttcataaatgatcagcatggtcgaataataataaggcagaacagttgaaactggagcagcagcacagccaggtggactggggacagcaaggagtcatcatgtcaggtagtcctggggcatggtcctacggctcaggtcctccgagagagagaaagagagaaggagagaattagagaacgcacacttagattcacacaggacaccgaataggacaggagaagtactccagatataac

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU406757 True 681 lncRNA 0.49 1 1508112 1508792

Neighbor

gene id symbol gene type direction distance location
LOC110523075 hook3 coding upstream 210630 1221663 ~ 1298618 (+)
LOC118964550 NA coding upstream 252210 1252825 ~ 1255902 (+)
LOC118964547 NA coding upstream 258436 1246001 ~ 1249676 (+)
LOC118964548 NA coding upstream 275868 1228087 ~ 1232244 (+)
LOC118964551 NA coding upstream 280079 1227617 ~ 1228033 (+)
LOC110523072 LOC106572640 coding downstream 200751 1709543 ~ 1828943 (+)
LOC110523096 NA coding downstream 388566 1897358 ~ 1904914 (+)
LOC110523104 LOC106572580 coding downstream 957339 2466131 ~ 2494292 (+)
LOC118964552 cntfr coding downstream 1146906 2655698 ~ 3017288 (+)
LOC110524930 LOC106572564 coding downstream 1524057 3032849 ~ 3107239 (+)
G358074 NA non-coding upstream 39058 1468355 ~ 1469054 (+)
G358034 NA non-coding upstream 140515 1363545 ~ 1367597 (+)
G358023 NA non-coding upstream 165328 1336987 ~ 1342784 (+)
G358020 NA non-coding upstream 171311 1329567 ~ 1336801 (+)
G358016 NA non-coding upstream 194094 1313748 ~ 1314018 (+)
G358230 NA non-coding downstream 51289 1560081 ~ 1598425 (+)
G358282 NA non-coding downstream 189292 1698084 ~ 1698302 (+)
G358295 NA non-coding downstream 199704 1708496 ~ 1709243 (+)
G358319 NA non-coding downstream 325603 1834395 ~ 1840629 (+)
G358320 NA non-coding downstream 327605 1836397 ~ 1871533 (+)
G358076 NA other upstream 32378 1474795 ~ 1475734 (+)
G358042 NA other upstream 117644 1388395 ~ 1390468 (+)
G357565 NA other upstream 567371 940235 ~ 940741 (+)
G357564 NA other upstream 568239 939068 ~ 939873 (+)
LOC110523070 inip other upstream 1091583 410761 ~ 416534 (+)
G358596 NA other downstream 537882 2046674 ~ 2047025 (+)
G359084 NA other downstream 1108086 2616878 ~ 2617330 (+)
G359294 NA other downstream 1492482 3001274 ~ 3002082 (+)

Expression


Co-expression Network