G358295


Basic Information

Item Value
gene id G358295
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 1708496 ~ 1709243 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU406855
ggtgattgacagagtcgaaagccttggccagatcaatgaatacggctgcacagtaatgtttcttatcgatggcggttaagatatcgtttaggaccttgagcgtggctgaggtgcacccatgaccagctctgaaaccagattgcgtagcagagaaggtatggtgagattcaaaatggtcggtaatctgtttgttgacttggctttcgaagaccttagaaaggcatggtaggatagatataggtctgtagcagtttgggtcaagagtgtccccccctttgaagagggggatgaccgcagctgctttccaatctatgggaatctcagacgacacgaaagagaggttgaacaggctagtaataggggtggcaacaatttcggcagatcattttagaaagaaagggtccagattgtctagcccggctgatttgtaggggtccagattttgcagctctttcagaacatcagctgaatggatttgggagaaggagaaatggggaaggcttgggcgagttgctgttgggggtgcagtgctgttgacaggggtaggagtagccaggtggaaagcatggccagcagtagaaaaatgcttattgaaatgttcaattatggtggatttatcagtggtgacagtgtttcctatcttcagtgcattgggcagctgggaggaggtgttcttattctccatggactttacagtgtcccagaacttttttgagttagtgttgcaagaagcaaatttctgcttgaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU406855 True 748 lncRNA 0.47 1 1708496 1709243

Neighbor

gene id symbol gene type direction distance location
LOC110523075 hook3 coding upstream 411014 1221663 ~ 1298618 (+)
LOC118964550 NA coding upstream 452594 1252825 ~ 1255902 (+)
LOC118964547 NA coding upstream 458820 1246001 ~ 1249676 (+)
LOC118964548 NA coding upstream 476252 1228087 ~ 1232244 (+)
LOC118964551 NA coding upstream 480463 1227617 ~ 1228033 (+)
LOC110523072 LOC106572640 coding downstream 300 1709543 ~ 1828943 (+)
LOC110523096 NA coding downstream 188115 1897358 ~ 1904914 (+)
LOC110523104 LOC106572580 coding downstream 756888 2466131 ~ 2494292 (+)
LOC118964552 cntfr coding downstream 946455 2655698 ~ 3017288 (+)
LOC110524930 LOC106572564 coding downstream 1323606 3032849 ~ 3107239 (+)
G358282 NA non-coding upstream 10194 1698084 ~ 1698302 (+)
G358230 NA non-coding upstream 110071 1560081 ~ 1598425 (+)
G358215 NA non-coding upstream 199704 1508112 ~ 1508792 (+)
G358074 NA non-coding upstream 239442 1468355 ~ 1469054 (+)
G358034 NA non-coding upstream 340899 1363545 ~ 1367597 (+)
G358319 NA non-coding downstream 125152 1834395 ~ 1840629 (+)
G358320 NA non-coding downstream 127154 1836397 ~ 1871533 (+)
G358318 NA non-coding downstream 128041 1837284 ~ 1875702 (+)
G358317 NA non-coding downstream 151051 1860294 ~ 1893452 (+)
G358475 NA non-coding downstream 204965 1914208 ~ 1914413 (+)
G358076 NA other upstream 232762 1474795 ~ 1475734 (+)
G358042 NA other upstream 318028 1388395 ~ 1390468 (+)
G357565 NA other upstream 767755 940235 ~ 940741 (+)
G357564 NA other upstream 768623 939068 ~ 939873 (+)
LOC110523070 inip other upstream 1291967 410761 ~ 416534 (+)
G358596 NA other downstream 337431 2046674 ~ 2047025 (+)
G359084 NA other downstream 907635 2616878 ~ 2617330 (+)
G359294 NA other downstream 1292031 3001274 ~ 3002082 (+)

Expression


Co-expression Network