G358772



Basic Information


Item Value
gene id G358772
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 2283463 ~ 2283726 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU407410
gcctaacattaggctctaactagtaAAGCAAACAGCTCTGGGAAACTAATAATAACGTCCTCTATGGAGccagcctgctaacgttagccatctagctaacagtacactttagcttaagacatatagctagctagctaggtaaacaatgaacctagctaggtaaacaacatTTAAGATCACAAAcgtcacgtaatgttagctaacgagccagcccgctaacgttagctaattaaACAACAATGAATAACTTGCCAACAATGCCAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU407410 True 264 lncRNA 0.41 1 2283463 2283726

Neighbor


gene id symbol gene type direction distance location
LOC110523096 NA coding upstream 378549 1897358 ~ 1904914 (+)
LOC110523072 LOC106572640 coding upstream 454520 1709543 ~ 1828943 (+)
LOC118964550 NA coding upstream 1027561 1252825 ~ 1255902 (+)
LOC118964547 NA coding upstream 1033787 1246001 ~ 1249676 (+)
LOC118964548 NA coding upstream 1051219 1228087 ~ 1232244 (+)
LOC110523104 LOC106572580 coding downstream 182405 2466131 ~ 2494292 (+)
LOC118964552 cntfr coding downstream 371972 2655698 ~ 3017288 (+)
LOC110524930 LOC106572564 coding downstream 749123 3032849 ~ 3107239 (+)
si:busm1-57f23.1 LOC106572555 coding downstream 856316 3140042 ~ 3148590 (+)
musk musk coding downstream 975205 3258931 ~ 3329266 (+)
G358758 NA non-coding upstream 17472 2265785 ~ 2265991 (+)
G358755 NA non-coding upstream 35820 2247288 ~ 2247643 (+)
G358597 NA non-coding upstream 190062 2053796 ~ 2093401 (+)
G358603 NA non-coding upstream 199526 2070861 ~ 2083937 (+)
G358520 NA non-coding upstream 302884 1976436 ~ 1980579 (+)
G358877 NA non-coding downstream 114854 2398580 ~ 2398808 (+)
G358884 NA non-coding downstream 123015 2406741 ~ 2407137 (+)
G358910 NA non-coding downstream 145703 2429429 ~ 2429689 (+)
G358920 NA non-coding downstream 153336 2437062 ~ 2437283 (+)
G358932 NA non-coding downstream 173792 2457518 ~ 2458077 (+)
G358596 NA other upstream 236438 2046674 ~ 2047025 (+)
G358076 NA other upstream 807729 1474795 ~ 1475734 (+)
G358042 NA other upstream 892995 1388395 ~ 1390468 (+)
G357565 NA other upstream 1342722 940235 ~ 940741 (+)
G359084 NA other downstream 333152 2616878 ~ 2617330 (+)
G359294 NA other downstream 717548 3001274 ~ 3002082 (+)
G359369 NA other downstream 933218 3216944 ~ 3217529 (+)
G359370 NA other downstream 941331 3225057 ~ 3231615 (+)

Expression



Co-expression Network