G359030


Basic Information

Item Value
gene id G359030
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 2547746 ~ 2548042 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU407729
CTTGTGGTGGTGATGAGAGTTGCATACCACAGTGATTTGAGTAGCAGAATGGTCCCACTTAAGTTCACTTTTctagatactttacttaggacagctaatcagccttACCTGTGATAGTCTGGGAGGTAATGTTATTGTCTCTACCTCGTGTTGAGTTCTAACCACTTTGGACGTGAGCTGCAACTCAACACCTCTCTGGTCTCATATGTTAATTCGTAACCCATCATTAACCCCCAAAAAACACATGAATAATTGTTCATATTTCATAGACAACGTAAAGGACTGACACTTCACATA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU407729 True 297 lncRNA 0.40 1 2547746 2548042

Neighbor

gene id symbol gene type direction distance location
LOC110523104 LOC106572580 coding upstream 53460 2466131 ~ 2494292 (+)
LOC110523096 NA coding upstream 642832 1897358 ~ 1904914 (+)
LOC110523072 LOC106572640 coding upstream 718803 1709543 ~ 1828943 (+)
LOC118964550 NA coding upstream 1291844 1252825 ~ 1255902 (+)
LOC118964547 NA coding upstream 1298070 1246001 ~ 1249676 (+)
LOC118964552 cntfr coding downstream 107656 2655698 ~ 3017288 (+)
LOC110524930 LOC106572564 coding downstream 484807 3032849 ~ 3107239 (+)
si:busm1-57f23.1 LOC106572555 coding downstream 592000 3140042 ~ 3148590 (+)
musk musk coding downstream 710889 3258931 ~ 3329266 (+)
grin3a LOC106572512 coding downstream 999906 3547948 ~ 3635115 (+)
G359010 NA non-coding upstream 10235 2534593 ~ 2537511 (+)
G359012 NA non-coding upstream 10656 2535677 ~ 2537090 (+)
G359011 NA non-coding upstream 11592 2535142 ~ 2536154 (+)
G358932 NA non-coding upstream 89669 2457518 ~ 2458077 (+)
G359033 NA non-coding downstream 1165 2549207 ~ 2549408 (+)
G359063 NA non-coding downstream 44696 2592738 ~ 2593396 (+)
G359094 NA non-coding downstream 81385 2629427 ~ 2629700 (+)
G359174 NA non-coding downstream 195743 2743785 ~ 2746911 (+)
G359186 NA non-coding downstream 225512 2773554 ~ 2774697 (+)
G358596 NA other upstream 500721 2046674 ~ 2047025 (+)
G358076 NA other upstream 1072012 1474795 ~ 1475734 (+)
G358042 NA other upstream 1157278 1388395 ~ 1390468 (+)
G357565 NA other upstream 1607005 940235 ~ 940741 (+)
G359084 NA other downstream 68836 2616878 ~ 2617330 (+)
G359294 NA other downstream 453232 3001274 ~ 3002082 (+)
G359369 NA other downstream 668902 3216944 ~ 3217529 (+)
G359370 NA other downstream 677015 3225057 ~ 3231615 (+)

Expression


Co-expression Network