G359209


Basic Information

Item Value
gene id G359209
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 2979184 ~ 2980862 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU407943
ggtaaaggatagataataaacagtaacggcagtatactgtaggtaggggtaaaggatagataataaacagtaacggcagtatactgtaggtaggggtaaagtgactagacaacaggatagataatggacagtaacagcagtatactgtaggtaggggtaaaggatagataatagacagtaacagcagtatactgtaggtaggggtaaaggatagataatagacagtaacagcagtatactgtaggtaggggtaaagtgactagacaacaggagataatagacagtaacagcagtatactgtaggtaggggtaaaggatagataatagacagcaacagcagtatactgtaggtaggggtaaaggatagataatagacagtaacagcagtatactgtaggtaggggtaaaggatagataatagacagcaacagcagtatactgtaggtaggggtaaaggatagataatagacagtaacagcagtatactgtaggtaggggtaaaggatagataatagacagtaacagcagtatactgtaggtaggggtaaagtgactagacaacaggatagataatagacagtaacagcagtatactgtaggtaggggtaaagtgactagacaacaggatagataatagacagtaacagcagtatactgtaggtaggggtaaaggatagataatagacagtaacagcagtagactgtaggtaggggtaaaggatagataatagacagtaatagcagtatactgtaggtaggggtaaaggatagataatagacagaaacagcagtatactgtaggtaggggtaaagtgactagacaacaggattgataatagacagtaacagcagtatactgtaggtaggggtaaaggatagataatagacagtagcagcagtatactgtaggtaggggtaaaggatagataatagacagtaacatcagtagactgtaggtaggggtaaaggatagataatagacagtaacagcagtatactgtaggtaggggtaaaggatagataatagacagtgacagcagtatactgtaggtaggggtaaaggataaataatagacagtaacagcagtatactgtaggtaggggtaaaggatagataatagacagtaacagcagtagactgtaggtaggggtaaaggatagataatagacagtaacagcagtatactgtaggtaggggtaaaggatagataatagacagtaacagcaatGGGTACTGTAGCAATTTGATTCGTTATTTAGTAGTCTTgttttaacagtcttatggcttgatgGTGAAAGCTGTTCAGGATATTGTTGGTTCCAGACATACTGCACTGGTActacttgctgtgcggtagcagagagaacagtctgtgacttgggtggctggagtctggagCCTCAGTGAGGACCATGTTATTTCCTTAGCGATGTGTACACCGAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU407943 True 1444 lncRNA 0.40 2 2979184 2980862

Neighbor

gene id symbol gene type direction distance location
LOC110523104 LOC106572580 coding upstream 484898 2466131 ~ 2494292 (+)
LOC110523096 NA coding upstream 1074270 1897358 ~ 1904914 (+)
LOC110523072 LOC106572640 coding upstream 1150241 1709543 ~ 1828943 (+)
LOC118964550 NA coding upstream 1723282 1252825 ~ 1255902 (+)
LOC118964547 NA coding upstream 1729508 1246001 ~ 1249676 (+)
LOC110524930 LOC106572564 coding downstream 51987 3032849 ~ 3107239 (+)
si:busm1-57f23.1 LOC106572555 coding downstream 159180 3140042 ~ 3148590 (+)
musk musk coding downstream 278069 3258931 ~ 3329266 (+)
grin3a LOC106572512 coding downstream 567086 3547948 ~ 3635115 (+)
LOC110523122 onecut2 coding downstream 1580488 4561350 ~ 4598776 (+)
G359277 NA non-coding upstream 1053 2977620 ~ 2978131 (+)
G359274 NA non-coding upstream 4597 2974300 ~ 2974587 (+)
G359269 NA non-coding upstream 20614 2957923 ~ 2958570 (+)
G359187 NA non-coding upstream 200902 2777309 ~ 2778282 (+)
G359185 NA non-coding upstream 202001 2774809 ~ 2777183 (+)
G359323 NA non-coding downstream 96177 3077039 ~ 3079967 (+)
G359328 NA non-coding downstream 132793 3113655 ~ 3121918 (+)
G359327 NA non-coding downstream 146556 3127418 ~ 3128171 (+)
G359333 NA non-coding downstream 158781 3139643 ~ 3143377 (+)
G359084 NA other upstream 361854 2616878 ~ 2617330 (+)
G358596 NA other upstream 932159 2046674 ~ 2047025 (+)
G358076 NA other upstream 1503450 1474795 ~ 1475734 (+)
G358042 NA other upstream 1588716 1388395 ~ 1390468 (+)
G359294 NA other downstream 20412 3001274 ~ 3002082 (+)
G359369 NA other downstream 236082 3216944 ~ 3217529 (+)
G359370 NA other downstream 244195 3225057 ~ 3231615 (+)
G359371 NA other downstream 248732 3229594 ~ 3237305 (+)

Expression


Co-expression Network