Gene
RNA
| Item | Value |
|---|---|
| gene id | G359328 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 3113655 ~ 3121918 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU408102 | False | 288 | lncRNA | 0.41 | 2 | 3113655 | 3121918 |
| TU408103 | False | 233 | lncRNA | 0.40 | 2 | 3113655 | 3117315 |
| TU408105 | True | 209 | lncRNA | 0.42 | 2 | 3113655 | 3119171 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524930 | LOC106572564 | coding | upstream | 6416 | 3032849 ~ 3107239 (+) |
| LOC118964552 | cntfr | coding | upstream | 96367 | 2655698 ~ 3017288 (+) |
| LOC110523104 | LOC106572580 | coding | upstream | 619369 | 2466131 ~ 2494292 (+) |
| LOC110523096 | NA | coding | upstream | 1208741 | 1897358 ~ 1904914 (+) |
| LOC110523072 | LOC106572640 | coding | upstream | 1284712 | 1709543 ~ 1828943 (+) |
| si:busm1-57f23.1 | LOC106572555 | coding | downstream | 18124 | 3140042 ~ 3148590 (+) |
| musk | musk | coding | downstream | 137013 | 3258931 ~ 3329266 (+) |
| grin3a | LOC106572512 | coding | downstream | 426030 | 3547948 ~ 3635115 (+) |
| LOC110523122 | onecut2 | coding | downstream | 1439432 | 4561350 ~ 4598776 (+) |
| LOC110523121 | LOC106572199 | coding | downstream | 1532228 | 4654146 ~ 4670585 (+) |
| G359323 | NA | non-coding | upstream | 33688 | 3077039 ~ 3079967 (+) |
| G359209 | NA | non-coding | upstream | 132793 | 2979184 ~ 2980862 (+) |
| G359277 | NA | non-coding | upstream | 135524 | 2977620 ~ 2978131 (+) |
| G359274 | NA | non-coding | upstream | 139068 | 2974300 ~ 2974587 (+) |
| G359327 | NA | non-coding | downstream | 5500 | 3127418 ~ 3128171 (+) |
| G359333 | NA | non-coding | downstream | 17725 | 3139643 ~ 3143377 (+) |
| G359338 | NA | non-coding | downstream | 24696 | 3146614 ~ 3147509 (+) |
| G359341 | NA | non-coding | downstream | 29510 | 3151428 ~ 3151728 (+) |
| G359343 | NA | non-coding | downstream | 32792 | 3154710 ~ 3158237 (+) |
| G359294 | NA | other | upstream | 111573 | 3001274 ~ 3002082 (+) |
| G359084 | NA | other | upstream | 496325 | 2616878 ~ 2617330 (+) |
| G358596 | NA | other | upstream | 1066630 | 2046674 ~ 2047025 (+) |
| G359369 | NA | other | downstream | 95026 | 3216944 ~ 3217529 (+) |
| G359370 | NA | other | downstream | 103139 | 3225057 ~ 3231615 (+) |
| G359371 | NA | other | downstream | 107676 | 3229594 ~ 3237305 (+) |
| G359438 | NA | other | downstream | 225591 | 3347509 ~ 3379319 (+) |
| G360121 | NA | other | downstream | 886830 | 4008748 ~ 4011356 (+) |
