G359333


Basic Information

Item Value
gene id G359333
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 3139643 ~ 3143377 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU408110
ttttctataggattgaggtcagggctttgtgatggccactcccataccttgactttgctgtccttaaattttgtcacaactttggaagtatgcttggggtcattgtccatttggaagacccatttgcgaccaagctttaacttcccgactgatgtcgtgagatgttgcttcaatacgtccacatcattttcctccctcatgatgccatctattttgtgaagtgcaccagaccctcctgcagaaaaacacccccacaacatgatgctgccacccccttgcttcacggttggggtggtgttcttcggcttgcaagcctccccctttttcctccaaacataacgatggtcattatggccaaactgttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU408110 True 365 lncRNA 0.47 2 3139643 3143377

Neighbor

gene id symbol gene type direction distance location
LOC110524930 LOC106572564 coding upstream 32404 3032849 ~ 3107239 (+)
LOC118964552 cntfr coding upstream 122355 2655698 ~ 3017288 (+)
LOC110523104 LOC106572580 coding upstream 645357 2466131 ~ 2494292 (+)
LOC110523096 NA coding upstream 1234729 1897358 ~ 1904914 (+)
LOC110523072 LOC106572640 coding upstream 1310700 1709543 ~ 1828943 (+)
musk musk coding downstream 115554 3258931 ~ 3329266 (+)
grin3a LOC106572512 coding downstream 404571 3547948 ~ 3635115 (+)
LOC110523122 onecut2 coding downstream 1417973 4561350 ~ 4598776 (+)
LOC110523121 LOC106572199 coding downstream 1510769 4654146 ~ 4670585 (+)
tcf4 tcf4 coding downstream 1765082 4908459 ~ 5339341 (+)
G359327 NA non-coding upstream 11472 3127418 ~ 3128171 (+)
G359328 NA non-coding upstream 17725 3113655 ~ 3121918 (+)
G359323 NA non-coding upstream 59676 3077039 ~ 3079967 (+)
G359209 NA non-coding upstream 158781 2979184 ~ 2980862 (+)
G359338 NA non-coding downstream 3237 3146614 ~ 3147509 (+)
G359341 NA non-coding downstream 8051 3151428 ~ 3151728 (+)
G359343 NA non-coding downstream 11333 3154710 ~ 3158237 (+)
G359347 NA non-coding downstream 20088 3163465 ~ 3164180 (+)
G359358 NA non-coding downstream 42657 3186034 ~ 3186300 (+)
G359294 NA other upstream 137561 3001274 ~ 3002082 (+)
G359084 NA other upstream 522313 2616878 ~ 2617330 (+)
G358596 NA other upstream 1092618 2046674 ~ 2047025 (+)
G359369 NA other downstream 73567 3216944 ~ 3217529 (+)
G359370 NA other downstream 81680 3225057 ~ 3231615 (+)
G359371 NA other downstream 86217 3229594 ~ 3237305 (+)
G359438 NA other downstream 204132 3347509 ~ 3379319 (+)
G360121 NA other downstream 865371 4008748 ~ 4011356 (+)

Expression


Co-expression Network