G359358


Basic Information

Item Value
gene id G359358
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 3186034 ~ 3186300 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU408175
GAAGGCCAGACACCACTCAACCACCTCACATCACCTGTTTACCCAGAAGGACAGACACCACTCAACCACCTCAAATCACCTGTTTACCCAGAAGGACAGACATCACTCAACCACCTCAAATCACCTGTTTACCCAGAAGGCCAGACACCACTCAACCACCTCAAATCACCTGTTTACCCAGAAGGACAGACATCACTCAACCACCTCACGTCACCTGTTTACCCAGAGGGCCAGACACCACTCAACCACCTTAGATCACCTGTTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU408175 True 267 lncRNA 0.51 1 3186034 3186300

Neighbor

gene id symbol gene type direction distance location
si:busm1-57f23.1 LOC106572555 coding upstream 37444 3140042 ~ 3148590 (+)
LOC110524930 LOC106572564 coding upstream 78795 3032849 ~ 3107239 (+)
LOC118964552 cntfr coding upstream 168746 2655698 ~ 3017288 (+)
LOC110523104 LOC106572580 coding upstream 691748 2466131 ~ 2494292 (+)
LOC110523096 NA coding upstream 1281120 1897358 ~ 1904914 (+)
musk musk coding downstream 72631 3258931 ~ 3329266 (+)
grin3a LOC106572512 coding downstream 361648 3547948 ~ 3635115 (+)
LOC110523122 onecut2 coding downstream 1375050 4561350 ~ 4598776 (+)
LOC110523121 LOC106572199 coding downstream 1467846 4654146 ~ 4670585 (+)
tcf4 tcf4 coding downstream 1722159 4908459 ~ 5339341 (+)
G359347 NA non-coding upstream 21854 3163465 ~ 3164180 (+)
G359343 NA non-coding upstream 27797 3154710 ~ 3158237 (+)
G359341 NA non-coding upstream 34306 3151428 ~ 3151728 (+)
G359338 NA non-coding upstream 38525 3146614 ~ 3147509 (+)
G359333 NA non-coding upstream 42657 3139643 ~ 3143377 (+)
G359360 NA non-coding downstream 2840 3189140 ~ 3189362 (+)
G359362 NA non-coding downstream 8961 3195261 ~ 3195483 (+)
G359364 NA non-coding downstream 12987 3199287 ~ 3199495 (+)
G359373 NA non-coding downstream 47526 3233826 ~ 3235728 (+)
G359375 NA non-coding downstream 53374 3239674 ~ 3239982 (+)
G359294 NA other upstream 183952 3001274 ~ 3002082 (+)
G359084 NA other upstream 568704 2616878 ~ 2617330 (+)
G358596 NA other upstream 1139009 2046674 ~ 2047025 (+)
G359369 NA other downstream 30644 3216944 ~ 3217529 (+)
G359370 NA other downstream 38757 3225057 ~ 3231615 (+)
G359371 NA other downstream 43294 3229594 ~ 3237305 (+)
G359438 NA other downstream 161209 3347509 ~ 3379319 (+)
G360121 NA other downstream 822448 4008748 ~ 4011356 (+)

Expression


Co-expression Network