Gene
RNA
| Item | Value |
|---|---|
| gene id | G359752 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 3192513 ~ 3193105 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Retrotransposable element Tf2 protein type 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU408665 | True | 593 | TUCP | 0.49 | 1 | 3192513 | 3193105 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rassf6 | LOC106572546 | coding | downstream | 7304 | 3154684 ~ 3185209 (-) |
| LOC118964539 | NA | coding | downstream | 1131655 | 2009134 ~ 2060858 (-) |
| LOC110523086 | LOC106572646 | coding | downstream | 1282166 | 1908949 ~ 1910347 (-) |
| LOC110517810 | trabd2a | coding | downstream | 1716813 | 1335667 ~ 1475700 (-) |
| LOC110523084 | rnf170 | coding | downstream | 1970819 | 1214832 ~ 1221694 (-) |
| lpar1 | LOC106572527 | coding | upstream | 199062 | 3392167 ~ 3453780 (-) |
| LOC118964540 | NA | coding | upstream | 304245 | 3497350 ~ 3498234 (-) |
| LOC110523109 | lppr1 | coding | upstream | 451065 | 3644170 ~ 3669873 (-) |
| LOC118964541 | NA | coding | upstream | 469394 | 3662499 ~ 3669678 (-) |
| LOC110513199 | dcc | coding | upstream | 591437 | 3782114 ~ 4417531 (-) |
| G359751 | NA | non-coding | downstream | 4111 | 3188202 ~ 3188402 (-) |
| G359735 | NA | non-coding | downstream | 43919 | 3146456 ~ 3148594 (-) |
| G359709 | NA | non-coding | downstream | 46904 | 3073980 ~ 3145609 (-) |
| G359730 | NA | non-coding | downstream | 56030 | 3136217 ~ 3136483 (-) |
| G359757 | NA | non-coding | upstream | 20387 | 3213492 ~ 3213712 (-) |
| G359761 | NA | non-coding | upstream | 44603 | 3237708 ~ 3237937 (-) |
| G359762 | NA | non-coding | upstream | 44856 | 3237961 ~ 3238435 (-) |
| G359763 | NA | non-coding | upstream | 45591 | 3238696 ~ 3238923 (-) |
| G359765 | NA | non-coding | upstream | 49224 | 3242329 ~ 3242577 (-) |
| G359712 | NA | other | downstream | 112175 | 3074545 ~ 3080338 (-) |
| G358446 | NA | other | downstream | 1299197 | 1834553 ~ 1893316 (-) |
| G358126 | NA | other | downstream | 1893862 | 1295528 ~ 1298651 (-) |
| G357797 | NA | other | downstream | 2373766 | 817154 ~ 818747 (-) |
| ythdc1 | ythdc1 | other | downstream | 2455945 | 724581 ~ 759382 (-) |
| G359989 | NA | other | upstream | 432243 | 3625348 ~ 3625776 (-) |
| G360015 | NA | other | upstream | 521127 | 3714232 ~ 3715552 (-) |
| G360345 | NA | other | upstream | 555131 | 3748236 ~ 3748718 (-) |
| G360532 | NA | other | upstream | 1106287 | 4299392 ~ 4300025 (-) |
