G359378


Basic Information

Item Value
gene id G359378
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 3242178 ~ 3242473 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU408196
gcgcagcaatgcacaTAGGCTATAAgtgcaaatgttccattagcagaaaaacaccattatcaaaggTGACCGCAATTGCGATTATGCGGGTAATGCTTTTATTAAAATGATGCATTTTTAAGGGGAAATTGatttccccaaacttgaaactcacatgcAGCTTatgtatgtatgccagttagactCTACACCCGTTGTAAAGCAGGTTAAtctgcttaattttaagaagttatttcaGCACTTAAGTTCTGATACAAATCTCATcaaaacatgtaggcctataggctgGGCTACAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU408196 True 296 lncRNA 0.38 1 3242178 3242473

Neighbor

gene id symbol gene type direction distance location
si:busm1-57f23.1 LOC106572555 coding upstream 93588 3140042 ~ 3148590 (+)
LOC110524930 LOC106572564 coding upstream 134939 3032849 ~ 3107239 (+)
LOC118964552 cntfr coding upstream 224890 2655698 ~ 3017288 (+)
LOC110523104 LOC106572580 coding upstream 747892 2466131 ~ 2494292 (+)
LOC110523096 NA coding upstream 1337264 1897358 ~ 1904914 (+)
musk musk coding downstream 16458 3258931 ~ 3329266 (+)
grin3a LOC106572512 coding downstream 305475 3547948 ~ 3635115 (+)
LOC110523122 onecut2 coding downstream 1318877 4561350 ~ 4598776 (+)
LOC110523121 LOC106572199 coding downstream 1411673 4654146 ~ 4670585 (+)
tcf4 tcf4 coding downstream 1665986 4908459 ~ 5339341 (+)
G359376 NA non-coding upstream 869 3241025 ~ 3241309 (+)
G359375 NA non-coding upstream 2196 3239674 ~ 3239982 (+)
G359373 NA non-coding upstream 6450 3233826 ~ 3235728 (+)
G359364 NA non-coding upstream 42683 3199287 ~ 3199495 (+)
G359362 NA non-coding upstream 46695 3195261 ~ 3195483 (+)
G359462 LOC106581475 non-coding downstream 181227 3423700 ~ 3423974 (+)
G359468 NA non-coding downstream 198716 3441189 ~ 3446334 (+)
G359494 NA non-coding downstream 251575 3494048 ~ 3495443 (+)
G359512 NA non-coding downstream 303706 3546179 ~ 3546898 (+)
G359513 NA non-coding downstream 307039 3549512 ~ 3549895 (+)
G359371 NA other upstream 4873 3229594 ~ 3237305 (+)
G359370 NA other upstream 10563 3225057 ~ 3231615 (+)
G359369 NA other upstream 24649 3216944 ~ 3217529 (+)
G359294 NA other upstream 240096 3001274 ~ 3002082 (+)
G359438 NA other downstream 105036 3347509 ~ 3379319 (+)
G360121 NA other downstream 766275 4008748 ~ 4011356 (+)
G360234 NA other downstream 1101609 4344082 ~ 4345517 (+)
G360261 NA other downstream 1177268 4419741 ~ 4420069 (+)
G360287 NA other downstream 1304562 4547035 ~ 4547856 (+)

Expression


Co-expression Network