G359512


Basic Information

Item Value
gene id G359512
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 3546179 ~ 3546898 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU408346
GGTATAATTGGTGATTGGTTCTGGCTCTCCTCATTTGGTAGTTAAGATACTATCTAAAGGTGTATGAAAACTTTGCAAACACTTTCTAAAGGGGTGTAAATACTACCctaaatgggtgtgaatactgtctAAAGGGGAGTAAATACTACCTAAATGGGTGTAAATACTgtctaaaggggtgtgaatactatctaaaggggtgtaaatactgtctaaaggggtgtgaatactgtctaaagg

Function

NR:

description
PREDICTED: lysine-rich arabinogalactan protein 19-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU408346 True 240 lncRNA 0.38 2 3546179 3546898

Neighbor

gene id symbol gene type direction distance location
musk musk coding upstream 216913 3258931 ~ 3329266 (+)
si:busm1-57f23.1 LOC106572555 coding upstream 397589 3140042 ~ 3148590 (+)
LOC110524930 LOC106572564 coding upstream 438940 3032849 ~ 3107239 (+)
LOC118964552 cntfr coding upstream 528891 2655698 ~ 3017288 (+)
LOC110523104 LOC106572580 coding upstream 1051893 2466131 ~ 2494292 (+)
grin3a LOC106572512 coding downstream 1050 3547948 ~ 3635115 (+)
LOC110523122 onecut2 coding downstream 1014452 4561350 ~ 4598776 (+)
LOC110523121 LOC106572199 coding downstream 1107248 4654146 ~ 4670585 (+)
tcf4 tcf4 coding downstream 1361561 4908459 ~ 5339341 (+)
LOC110524934 LOC106572350 coding downstream 1870570 5417468 ~ 5458865 (+)
G359494 NA non-coding upstream 50736 3494048 ~ 3495443 (+)
G359468 NA non-coding upstream 99845 3441189 ~ 3446334 (+)
G359462 LOC106581475 non-coding upstream 122205 3423700 ~ 3423974 (+)
G359378 NA non-coding upstream 303706 3242178 ~ 3242473 (+)
G359376 NA non-coding upstream 304870 3241025 ~ 3241309 (+)
G359513 NA non-coding downstream 2614 3549512 ~ 3549895 (+)
G359932 NA non-coding downstream 47812 3594710 ~ 3595419 (+)
G359941 NA non-coding downstream 65493 3612391 ~ 3614606 (+)
G359943 NA non-coding downstream 67992 3614890 ~ 3615315 (+)
G359949 NA non-coding downstream 72495 3619393 ~ 3619687 (+)
G359438 NA other upstream 166860 3347509 ~ 3379319 (+)
G359371 NA other upstream 308874 3229594 ~ 3237305 (+)
G359370 NA other upstream 314564 3225057 ~ 3231615 (+)
G359369 NA other upstream 328650 3216944 ~ 3217529 (+)
G360121 NA other downstream 461850 4008748 ~ 4011356 (+)
G360234 NA other downstream 797184 4344082 ~ 4345517 (+)
G360261 NA other downstream 872843 4419741 ~ 4420069 (+)
G360287 NA other downstream 1000137 4547035 ~ 4547856 (+)
G360276 sync other downstream 1092118 4639016 ~ 4648000 (+)

Expression


Co-expression Network