Gene
RNA
| Item | Value |
|---|---|
| gene id | G359943 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 3614890 ~ 3615315 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU408881 | True | 426 | lncRNA | 0.38 | 1 | 3614890 | 3615315 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| musk | musk | coding | upstream | 285624 | 3258931 ~ 3329266 (+) |
| si:busm1-57f23.1 | LOC106572555 | coding | upstream | 466300 | 3140042 ~ 3148590 (+) |
| LOC110524930 | LOC106572564 | coding | upstream | 507651 | 3032849 ~ 3107239 (+) |
| LOC118964552 | cntfr | coding | upstream | 597602 | 2655698 ~ 3017288 (+) |
| LOC110523104 | LOC106572580 | coding | upstream | 1120604 | 2466131 ~ 2494292 (+) |
| LOC110523122 | onecut2 | coding | downstream | 946035 | 4561350 ~ 4598776 (+) |
| LOC110523121 | LOC106572199 | coding | downstream | 1038831 | 4654146 ~ 4670585 (+) |
| tcf4 | tcf4 | coding | downstream | 1293144 | 4908459 ~ 5339341 (+) |
| LOC110524934 | LOC106572350 | coding | downstream | 1802153 | 5417468 ~ 5458865 (+) |
| LOC110524936 | NA | coding | downstream | 1961699 | 5577014 ~ 5577940 (+) |
| G359941 | NA | non-coding | upstream | 284 | 3612391 ~ 3614606 (+) |
| G359932 | NA | non-coding | upstream | 19471 | 3594710 ~ 3595419 (+) |
| G359513 | NA | non-coding | upstream | 64995 | 3549512 ~ 3549895 (+) |
| G359512 | NA | non-coding | upstream | 67992 | 3546179 ~ 3546898 (+) |
| G359494 | NA | non-coding | upstream | 119447 | 3494048 ~ 3495443 (+) |
| G359949 | NA | non-coding | downstream | 4078 | 3619393 ~ 3619687 (+) |
| G359950 | NA | non-coding | downstream | 9574 | 3624889 ~ 3625774 (+) |
| G359951 | NA | non-coding | downstream | 15539 | 3630854 ~ 3631692 (+) |
| G359957 | NA | non-coding | downstream | 77608 | 3692923 ~ 3726946 (+) |
| G359980 | NA | non-coding | downstream | 96581 | 3711896 ~ 3717842 (+) |
| G359438 | NA | other | upstream | 235571 | 3347509 ~ 3379319 (+) |
| G359371 | NA | other | upstream | 377585 | 3229594 ~ 3237305 (+) |
| G359370 | NA | other | upstream | 383275 | 3225057 ~ 3231615 (+) |
| G359369 | NA | other | upstream | 397361 | 3216944 ~ 3217529 (+) |
| G360121 | NA | other | downstream | 393433 | 4008748 ~ 4011356 (+) |
| G360234 | NA | other | downstream | 728767 | 4344082 ~ 4345517 (+) |
| G360261 | NA | other | downstream | 804426 | 4419741 ~ 4420069 (+) |
| G360287 | NA | other | downstream | 931720 | 4547035 ~ 4547856 (+) |
| G360276 | sync | other | downstream | 1023701 | 4639016 ~ 4648000 (+) |
