G359949



Basic Information


Item Value
gene id G359949
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 3619393 ~ 3619687 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU408889
ggtaccagcagaaacacaacatgacagagtagagactgataccagcagaaacacaacatgacagagtagaggattggtaccaacagaaacacaacatgacagagtagagactgataccagcagaaacacaacatgacagagtagaggattggtaccagcagaaacacaacatgacagagtagaggattggtaccagcagaaacacaacatgacagagtagaggattggtaccagcagaaacacaacatgacagagtagagactgataccagcagaaacacaacatgacagagtag

Function


GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU408889 True 295 lncRNA 0.44 1 3619393 3619687

Neighbor


gene id symbol gene type direction distance location
musk musk coding upstream 290127 3258931 ~ 3329266 (+)
si:busm1-57f23.1 LOC106572555 coding upstream 470803 3140042 ~ 3148590 (+)
LOC110524930 LOC106572564 coding upstream 512154 3032849 ~ 3107239 (+)
LOC118964552 cntfr coding upstream 602105 2655698 ~ 3017288 (+)
LOC110523104 LOC106572580 coding upstream 1125107 2466131 ~ 2494292 (+)
LOC110523122 onecut2 coding downstream 941663 4561350 ~ 4598776 (+)
LOC110523121 LOC106572199 coding downstream 1034459 4654146 ~ 4670585 (+)
tcf4 tcf4 coding downstream 1288772 4908459 ~ 5339341 (+)
LOC110524934 LOC106572350 coding downstream 1797781 5417468 ~ 5458865 (+)
LOC110524936 NA coding downstream 1957327 5577014 ~ 5577940 (+)
G359943 NA non-coding upstream 4078 3614890 ~ 3615315 (+)
G359941 NA non-coding upstream 4787 3612391 ~ 3614606 (+)
G359932 NA non-coding upstream 23974 3594710 ~ 3595419 (+)
G359513 NA non-coding upstream 69498 3549512 ~ 3549895 (+)
G359512 NA non-coding upstream 72495 3546179 ~ 3546898 (+)
G359950 NA non-coding downstream 5202 3624889 ~ 3625774 (+)
G359951 NA non-coding downstream 11167 3630854 ~ 3631692 (+)
G359957 NA non-coding downstream 73236 3692923 ~ 3726946 (+)
G359980 NA non-coding downstream 92209 3711896 ~ 3717842 (+)
G360024 NA non-coding downstream 111548 3731235 ~ 3731437 (+)
G359438 NA other upstream 240074 3347509 ~ 3379319 (+)
G359371 NA other upstream 382088 3229594 ~ 3237305 (+)
G359370 NA other upstream 387778 3225057 ~ 3231615 (+)
G359369 NA other upstream 401864 3216944 ~ 3217529 (+)
G360121 NA other downstream 389061 4008748 ~ 4011356 (+)
G360234 NA other downstream 724395 4344082 ~ 4345517 (+)
G360261 NA other downstream 800054 4419741 ~ 4420069 (+)
G360287 NA other downstream 927348 4547035 ~ 4547856 (+)
G360276 sync other downstream 1019329 4639016 ~ 4648000 (+)

Expression



Co-expression Network