G359980


Basic Information

Item Value
gene id G359980
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 3711896 ~ 3717842 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU408947
ccagaaccccctgtatatagcctccacattgactctgtaccggtaccccctgtatatagcctccacaatgactctgtaccgtaacaccctgtatatagcctccacattgactctgtaccgtaacaccctgtatatagcctccacattgactctgtaccggtaccccctgtatatagcctccacattgactctgtaccgtaacaccctgtacatagcctccacattgactctgtaccggtaccccctgtatatagcctccacattgactctgtaccggtaccccctgtatatagcctccacattgactctgtaccggtaccccctgtatataaccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU408947 True 335 lncRNA 0.50 2 3711896 3717842

Neighbor

gene id symbol gene type direction distance location
grin3a LOC106572512 coding upstream 76781 3547948 ~ 3635115 (+)
musk musk coding upstream 382630 3258931 ~ 3329266 (+)
si:busm1-57f23.1 LOC106572555 coding upstream 563306 3140042 ~ 3148590 (+)
LOC110524930 LOC106572564 coding upstream 604657 3032849 ~ 3107239 (+)
LOC118964552 cntfr coding upstream 694608 2655698 ~ 3017288 (+)
LOC110523122 onecut2 coding downstream 843508 4561350 ~ 4598776 (+)
LOC110523121 LOC106572199 coding downstream 936304 4654146 ~ 4670585 (+)
tcf4 tcf4 coding downstream 1190617 4908459 ~ 5339341 (+)
LOC110524934 LOC106572350 coding downstream 1699626 5417468 ~ 5458865 (+)
LOC110524936 NA coding downstream 1859172 5577014 ~ 5577940 (+)
G359951 NA non-coding upstream 80204 3630854 ~ 3631692 (+)
G359950 NA non-coding upstream 86122 3624889 ~ 3625774 (+)
G359949 NA non-coding upstream 92209 3619393 ~ 3619687 (+)
G359943 NA non-coding upstream 96581 3614890 ~ 3615315 (+)
G359941 NA non-coding upstream 97290 3612391 ~ 3614606 (+)
G360024 NA non-coding downstream 13393 3731235 ~ 3731437 (+)
G360025 NA non-coding downstream 13968 3731810 ~ 3732269 (+)
G360031 NA non-coding downstream 30485 3748327 ~ 3748713 (+)
G360035 NA non-coding downstream 41653 3759495 ~ 3759772 (+)
G360037 NA non-coding downstream 44102 3761944 ~ 3762218 (+)
G359438 NA other upstream 332577 3347509 ~ 3379319 (+)
G359371 NA other upstream 474591 3229594 ~ 3237305 (+)
G359370 NA other upstream 480281 3225057 ~ 3231615 (+)
G359369 NA other upstream 494367 3216944 ~ 3217529 (+)
G360121 NA other downstream 290906 4008748 ~ 4011356 (+)
G360234 NA other downstream 626240 4344082 ~ 4345517 (+)
G360261 NA other downstream 701899 4419741 ~ 4420069 (+)
G360287 NA other downstream 829193 4547035 ~ 4547856 (+)
G360276 sync other downstream 921174 4639016 ~ 4648000 (+)

Expression


Co-expression Network