G360086


Basic Information

Item Value
gene id G360086
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 3894875 ~ 3895142 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU409064
AGTCTGGTGCAGCGCAACATTATAAACTAAAGCACTGATCAGTGGGAACAGAGATCAGAGTGACCGCTAAAGGTGGACAACAACATTATAAACTAAAGCACTGATCAGTGGGAACAGAGATCAGAGTGACCGCTAAAGGTGGACAACAACATTATAAACTAAAGCACTGATCAGTGGGAACAGAGATCAGAGTGACCGCTAA
>TU409065
AGTCTGGTGCAGCGCAACATTATAAACTAAAGCACTGATCAGTGGGAACAGAGATCAGAGTGACCGCTAAAGGTGGACAACAACATTATAAACTAAAGCACTGATCAGTGGGAACAGAGATCAGAGTGACCGCTAAAGGTGGACAACAACATTATAAACTAAAGCACTGATCAGTGGGAACAGAGATCAGAGTGACCGCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU409064 False 202 lncRNA 0.44 2 3894875 3895142
TU409065 True 202 lncRNA 0.44 2 3894875 3895142

Neighbor

gene id symbol gene type direction distance location
grin3a LOC106572512 coding upstream 259760 3547948 ~ 3635115 (+)
musk musk coding upstream 565609 3258931 ~ 3329266 (+)
si:busm1-57f23.1 LOC106572555 coding upstream 746285 3140042 ~ 3148590 (+)
LOC110524930 LOC106572564 coding upstream 787636 3032849 ~ 3107239 (+)
LOC118964552 cntfr coding upstream 877587 2655698 ~ 3017288 (+)
LOC110523122 onecut2 coding downstream 666208 4561350 ~ 4598776 (+)
LOC110523121 LOC106572199 coding downstream 759004 4654146 ~ 4670585 (+)
tcf4 tcf4 coding downstream 1013317 4908459 ~ 5339341 (+)
LOC110524934 LOC106572350 coding downstream 1522326 5417468 ~ 5458865 (+)
LOC110524936 NA coding downstream 1681872 5577014 ~ 5577940 (+)
G360083 NA non-coding upstream 4831 3889620 ~ 3890044 (+)
G360038 NA non-coding upstream 132210 3762455 ~ 3762665 (+)
G360037 NA non-coding upstream 132657 3761944 ~ 3762218 (+)
G360035 NA non-coding upstream 135103 3759495 ~ 3759772 (+)
G360031 NA non-coding upstream 146162 3748327 ~ 3748713 (+)
G360107 NA non-coding downstream 76337 3971479 ~ 3971863 (+)
G360114 NA non-coding downstream 92985 3988127 ~ 4039165 (+)
G360134 NA non-coding downstream 158905 4054047 ~ 4054310 (+)
G360137 NA non-coding downstream 166490 4061632 ~ 4061975 (+)
G360147 NA non-coding downstream 211424 4106566 ~ 4106820 (+)
G359438 NA other upstream 515556 3347509 ~ 3379319 (+)
G359371 NA other upstream 657570 3229594 ~ 3237305 (+)
G359370 NA other upstream 663260 3225057 ~ 3231615 (+)
G359369 NA other upstream 677346 3216944 ~ 3217529 (+)
G360121 NA other downstream 113606 4008748 ~ 4011356 (+)
G360234 NA other downstream 448940 4344082 ~ 4345517 (+)
G360261 NA other downstream 524599 4419741 ~ 4420069 (+)
G360287 NA other downstream 651893 4547035 ~ 4547856 (+)
G360276 sync other downstream 743874 4639016 ~ 4648000 (+)

Expression


Co-expression Network