G360107


Basic Information

Item Value
gene id G360107
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 3971479 ~ 3971863 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU409088
GTGTCTTTGTGTCTTTACCGTCAAGGTCGTTCTCTGGCGTCTCGGCGGTGAACCACTCGCTGGCCGGGCCCGTGCCGTTAGCTGTCATGGCAGAGACCTGGAAACTGTACTGACTGCCTTTTTCCagccctgagaggagagaggatgttgTGACAGACACATCTGTACTGACTGATTTTCTACAGCCCTGAGACAGAGACGCACAACAACGTCAGAAAGATATTTTTAAAGAAACACGACGACACATAGATGTTAATGAAAACAGTACTTTACACAAACCTGAGTCTGTAAACACGGGGTGGTAAACACGACAACATCACAGAGACA

Function

NR:

description
PREDICTED: netrin receptor DCC-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU409088 True 327 lncRNA 0.48 2 3971479 3971863

Neighbor

gene id symbol gene type direction distance location
grin3a LOC106572512 coding upstream 336364 3547948 ~ 3635115 (+)
musk musk coding upstream 642213 3258931 ~ 3329266 (+)
si:busm1-57f23.1 LOC106572555 coding upstream 822889 3140042 ~ 3148590 (+)
LOC110524930 LOC106572564 coding upstream 864240 3032849 ~ 3107239 (+)
LOC118964552 cntfr coding upstream 954191 2655698 ~ 3017288 (+)
LOC110523122 onecut2 coding downstream 589487 4561350 ~ 4598776 (+)
LOC110523121 LOC106572199 coding downstream 682283 4654146 ~ 4670585 (+)
tcf4 tcf4 coding downstream 936596 4908459 ~ 5339341 (+)
LOC110524934 LOC106572350 coding downstream 1445605 5417468 ~ 5458865 (+)
LOC110524936 NA coding downstream 1605151 5577014 ~ 5577940 (+)
G360086 NA non-coding upstream 76337 3894875 ~ 3895142 (+)
G360083 NA non-coding upstream 81435 3889620 ~ 3890044 (+)
G360038 NA non-coding upstream 208814 3762455 ~ 3762665 (+)
G360037 NA non-coding upstream 209261 3761944 ~ 3762218 (+)
G360035 NA non-coding upstream 211707 3759495 ~ 3759772 (+)
G360114 NA non-coding downstream 16264 3988127 ~ 4039165 (+)
G360134 NA non-coding downstream 82184 4054047 ~ 4054310 (+)
G360137 NA non-coding downstream 89769 4061632 ~ 4061975 (+)
G360147 NA non-coding downstream 134703 4106566 ~ 4106820 (+)
G360149 NA non-coding downstream 141681 4113544 ~ 4113764 (+)
G359438 NA other upstream 592160 3347509 ~ 3379319 (+)
G359371 NA other upstream 734174 3229594 ~ 3237305 (+)
G359370 NA other upstream 739864 3225057 ~ 3231615 (+)
G359369 NA other upstream 753950 3216944 ~ 3217529 (+)
G360121 NA other downstream 36885 4008748 ~ 4011356 (+)
G360234 NA other downstream 372219 4344082 ~ 4345517 (+)
G360261 NA other downstream 447878 4419741 ~ 4420069 (+)
G360287 NA other downstream 575172 4547035 ~ 4547856 (+)
G360276 sync other downstream 667153 4639016 ~ 4648000 (+)

Expression


Co-expression Network