G360137


Basic Information

Item Value
gene id G360137
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 4061632 ~ 4061975 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU409139
ccatgtacaacgtagaacaccaaataatgcatgcagagcagaattaggccgatacccactaattatcaaaatccagaaaagagccattaaattctataaccacctaaaaggaagcgattcccaaaccttccacaacaaagccatcacctacagagagatgaacctggaaaagagtcccctaagcaagctggtcctggggctctgttcacaaacacaaacacaccctacagagccccaggacaacagcacaattagacccaaccaaatcatgagaaaacaaaaagataattacttgacacattggaaagaattaacaaaaaaactgagagTACACAgcgacagaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU409139 True 344 lncRNA 0.42 1 4061632 4061975

Neighbor

gene id symbol gene type direction distance location
grin3a LOC106572512 coding upstream 426517 3547948 ~ 3635115 (+)
musk musk coding upstream 732366 3258931 ~ 3329266 (+)
si:busm1-57f23.1 LOC106572555 coding upstream 913042 3140042 ~ 3148590 (+)
LOC110524930 LOC106572564 coding upstream 954393 3032849 ~ 3107239 (+)
LOC118964552 cntfr coding upstream 1044344 2655698 ~ 3017288 (+)
LOC110523122 onecut2 coding downstream 499375 4561350 ~ 4598776 (+)
LOC110523121 LOC106572199 coding downstream 592171 4654146 ~ 4670585 (+)
tcf4 tcf4 coding downstream 846484 4908459 ~ 5339341 (+)
LOC110524934 LOC106572350 coding downstream 1355493 5417468 ~ 5458865 (+)
LOC110524936 NA coding downstream 1515039 5577014 ~ 5577940 (+)
G360134 NA non-coding upstream 7322 4054047 ~ 4054310 (+)
G360114 NA non-coding upstream 22467 3988127 ~ 4039165 (+)
G360107 NA non-coding upstream 89769 3971479 ~ 3971863 (+)
G360086 NA non-coding upstream 166490 3894875 ~ 3895142 (+)
G360083 NA non-coding upstream 171588 3889620 ~ 3890044 (+)
G360147 NA non-coding downstream 44591 4106566 ~ 4106820 (+)
G360149 NA non-coding downstream 51569 4113544 ~ 4113764 (+)
G360173 NA non-coding downstream 106388 4168363 ~ 4168637 (+)
G360184 dcc non-coding downstream 156365 4218340 ~ 4218696 (+)
G360187 NA non-coding downstream 159627 4221602 ~ 4222118 (+)
G360121 NA other upstream 50276 4008748 ~ 4011356 (+)
G359438 NA other upstream 682313 3347509 ~ 3379319 (+)
G359371 NA other upstream 824327 3229594 ~ 3237305 (+)
G359370 NA other upstream 830017 3225057 ~ 3231615 (+)
G359369 NA other upstream 844103 3216944 ~ 3217529 (+)
G360234 NA other downstream 282107 4344082 ~ 4345517 (+)
G360261 NA other downstream 357766 4419741 ~ 4420069 (+)
G360287 NA other downstream 485060 4547035 ~ 4547856 (+)
G360276 sync other downstream 577041 4639016 ~ 4648000 (+)
G360985 NA other downstream 1234895 5296870 ~ 5299403 (+)

Expression


Co-expression Network