G360184 (dcc)


Basic Information

Item Value
gene id G360184
gene name dcc
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 4218340 ~ 4218696 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU409193
GTACTACAATAAAGTGCTCTTACCAGAAACAGTCACTTGAGCCGTTCTGCTGACGATGGCCCCCACCCCATCCAGCCTGGCCAGACACTGGTAGAGCCCCTCGTCAGGTCGGTGGTGTCGTGAATGAACCACGTTCTGGACCACTAGAGACCCGTTAGGGAACTGCTGTCTCCTCTCGTCCACCACGGCACTGAGCAACACCCCGTCCTTCTTCCAGACGATGATTGGAATACCCTGGTCTGACTGAGCCTCACAGTCCAGCTGAAGAACACCTCCCCGTAATGTCACCGCGTCCTGGGGTTCCAGAACGAAGCTGAAGTCCACGAACACCTGGGACGATGAGGAGGACTGTGCacc

Function

symbol description
dcc Enables netrin receptor activity involved in chemoattraction. Acts upstream of or within with a positive effect on commissural neuron axon guidance. Acts upstream of or within neuron differentiation and regulation of axon extension. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including brain; neural tube; pleuroperitoneal region; posterior neural rod; and primary motor neurons. Human ortholog(s) of this gene implicated in colorectal cancer; congenital mirror movement disorder; esophageal cancer; and esophagus squamous cell carcinoma. Orthologous to human DCC (DCC netrin 1 receptor).

NR:

description
hypothetical protein cypCar_00040499, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU409193 True 357 lncRNA 0.57 1 4218340 4218696

Neighbor

gene id symbol gene type direction distance location
grin3a LOC106572512 coding upstream 583225 3547948 ~ 3635115 (+)
musk musk coding upstream 889074 3258931 ~ 3329266 (+)
si:busm1-57f23.1 LOC106572555 coding upstream 1069750 3140042 ~ 3148590 (+)
LOC110524930 LOC106572564 coding upstream 1111101 3032849 ~ 3107239 (+)
LOC118964552 cntfr coding upstream 1201052 2655698 ~ 3017288 (+)
LOC110523122 onecut2 coding downstream 342654 4561350 ~ 4598776 (+)
LOC110523121 LOC106572199 coding downstream 435450 4654146 ~ 4670585 (+)
tcf4 tcf4 coding downstream 689763 4908459 ~ 5339341 (+)
LOC110524934 LOC106572350 coding downstream 1198772 5417468 ~ 5458865 (+)
LOC110524936 NA coding downstream 1358318 5577014 ~ 5577940 (+)
G360173 NA non-coding upstream 49703 4168363 ~ 4168637 (+)
G360149 NA non-coding upstream 104576 4113544 ~ 4113764 (+)
G360147 NA non-coding upstream 111520 4106566 ~ 4106820 (+)
G360137 NA non-coding upstream 156365 4061632 ~ 4061975 (+)
G360134 NA non-coding upstream 164030 4054047 ~ 4054310 (+)
G360187 NA non-coding downstream 2906 4221602 ~ 4222118 (+)
G360192 NA non-coding downstream 25708 4244404 ~ 4245823 (+)
G360195 LOC101886070 non-coding downstream 33797 4252493 ~ 4252891 (+)
G360197 NA non-coding downstream 34861 4253557 ~ 4253951 (+)
G360212 NA non-coding downstream 61698 4280394 ~ 4285284 (+)
G360121 NA other upstream 206984 4008748 ~ 4011356 (+)
G359438 NA other upstream 839021 3347509 ~ 3379319 (+)
G359371 NA other upstream 981035 3229594 ~ 3237305 (+)
G359370 NA other upstream 986725 3225057 ~ 3231615 (+)
G359369 NA other upstream 1000811 3216944 ~ 3217529 (+)
G360234 NA other downstream 125386 4344082 ~ 4345517 (+)
G360261 NA other downstream 201045 4419741 ~ 4420069 (+)
G360287 NA other downstream 328339 4547035 ~ 4547856 (+)
G360276 sync other downstream 420320 4639016 ~ 4648000 (+)
G360985 NA other downstream 1078174 5296870 ~ 5299403 (+)

Expression


Co-expression Network