G360187


Basic Information

Item Value
gene id G360187
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 4221602 ~ 4222118 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU409196
tcattgtgtatttagaactatctcctgctcattgggtatttagatctcctgctcattgggtatttagatctcctgttcattgtgtatttagaactatctcctgctcattgagtatttagaactatctcctgctcattgggtatttagatctcctgttcattgtgtatttataactatctcctgctcattgagtatttagaactatctcctgctcattgagtatttagaactatctcctgctcattgagtatttagaactatctcctgctcattgagtatttagaactatctcctgctcattgagtatttagaactatcccctgttcattgagtatttagaactatctcctgctcattgagtatttagaactatctcctgctcattgagtatttagaactatctcctgctcattgagtatttagaactatctcctgttcattgtgtatttagaactatctcctgctcattgggtatttagatctcctgcttattgggtatttagatctcctgttcatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU409196 True 517 lncRNA 0.36 1 4221602 4222118

Neighbor

gene id symbol gene type direction distance location
grin3a LOC106572512 coding upstream 586487 3547948 ~ 3635115 (+)
musk musk coding upstream 892336 3258931 ~ 3329266 (+)
si:busm1-57f23.1 LOC106572555 coding upstream 1073012 3140042 ~ 3148590 (+)
LOC110524930 LOC106572564 coding upstream 1114363 3032849 ~ 3107239 (+)
LOC118964552 cntfr coding upstream 1204314 2655698 ~ 3017288 (+)
LOC110523122 onecut2 coding downstream 339232 4561350 ~ 4598776 (+)
LOC110523121 LOC106572199 coding downstream 432028 4654146 ~ 4670585 (+)
tcf4 tcf4 coding downstream 686341 4908459 ~ 5339341 (+)
LOC110524934 LOC106572350 coding downstream 1195350 5417468 ~ 5458865 (+)
LOC110524936 NA coding downstream 1354896 5577014 ~ 5577940 (+)
G360184 dcc non-coding upstream 2906 4218340 ~ 4218696 (+)
G360173 NA non-coding upstream 52965 4168363 ~ 4168637 (+)
G360149 NA non-coding upstream 107838 4113544 ~ 4113764 (+)
G360147 NA non-coding upstream 114782 4106566 ~ 4106820 (+)
G360137 NA non-coding upstream 159627 4061632 ~ 4061975 (+)
G360192 NA non-coding downstream 22286 4244404 ~ 4245823 (+)
G360195 LOC101886070 non-coding downstream 30375 4252493 ~ 4252891 (+)
G360197 NA non-coding downstream 31439 4253557 ~ 4253951 (+)
G360212 NA non-coding downstream 58276 4280394 ~ 4285284 (+)
G360218 NA non-coding downstream 72756 4294874 ~ 4295332 (+)
G360121 NA other upstream 210246 4008748 ~ 4011356 (+)
G359438 NA other upstream 842283 3347509 ~ 3379319 (+)
G359371 NA other upstream 984297 3229594 ~ 3237305 (+)
G359370 NA other upstream 989987 3225057 ~ 3231615 (+)
G359369 NA other upstream 1004073 3216944 ~ 3217529 (+)
G360234 NA other downstream 121964 4344082 ~ 4345517 (+)
G360261 NA other downstream 197623 4419741 ~ 4420069 (+)
G360287 NA other downstream 324917 4547035 ~ 4547856 (+)
G360276 sync other downstream 416898 4639016 ~ 4648000 (+)
G360985 NA other downstream 1074752 5296870 ~ 5299403 (+)

Expression


Co-expression Network