G360195 (LOC101886070)


Basic Information

Item Value
gene id G360195
gene name LOC101886070
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 4252493 ~ 4252891 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU409206
CTAATAGTGTATTCATGAGACAGACGATCAGATGGTATTGAATGAACATGGCAGTTGTGGTGATGAAAGAGTATTAAAAAACTCTCACTTTGAAGAATCAGCCTGTATCCAAAGTGAAGAGAGCTgaacaaaacagaacagaacagaaaagaacagagtagaacataacagaacagagcagaacagaacagaacagaacagagtagaacagaacagaacagagcagaacagaacagaacagagtagaacagaacagaacagaacagaacagagcagaacagagcagaacagaacagaacagaacagagtagaacagaacagaacagaac

Function

NR:

description
keratin-associated protein 4-8-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU409206 True 329 lncRNA 0.40 2 4252493 4252891

Neighbor

gene id symbol gene type direction distance location
grin3a LOC106572512 coding upstream 617378 3547948 ~ 3635115 (+)
musk musk coding upstream 923227 3258931 ~ 3329266 (+)
si:busm1-57f23.1 LOC106572555 coding upstream 1103903 3140042 ~ 3148590 (+)
LOC110524930 LOC106572564 coding upstream 1145254 3032849 ~ 3107239 (+)
LOC118964552 cntfr coding upstream 1235205 2655698 ~ 3017288 (+)
LOC110523122 onecut2 coding downstream 308459 4561350 ~ 4598776 (+)
LOC110523121 LOC106572199 coding downstream 401255 4654146 ~ 4670585 (+)
tcf4 tcf4 coding downstream 655568 4908459 ~ 5339341 (+)
LOC110524934 LOC106572350 coding downstream 1164577 5417468 ~ 5458865 (+)
LOC110524936 NA coding downstream 1324123 5577014 ~ 5577940 (+)
G360192 NA non-coding upstream 6670 4244404 ~ 4245823 (+)
G360187 NA non-coding upstream 30375 4221602 ~ 4222118 (+)
G360184 dcc non-coding upstream 33797 4218340 ~ 4218696 (+)
G360173 NA non-coding upstream 83856 4168363 ~ 4168637 (+)
G360149 NA non-coding upstream 138729 4113544 ~ 4113764 (+)
G360197 NA non-coding downstream 666 4253557 ~ 4253951 (+)
G360212 NA non-coding downstream 27503 4280394 ~ 4285284 (+)
G360218 NA non-coding downstream 41983 4294874 ~ 4295332 (+)
G360226 NA non-coding downstream 58767 4311658 ~ 4312195 (+)
G360235 NA non-coding downstream 93708 4346599 ~ 4347050 (+)
G360121 NA other upstream 241137 4008748 ~ 4011356 (+)
G359438 NA other upstream 873174 3347509 ~ 3379319 (+)
G359371 NA other upstream 1015188 3229594 ~ 3237305 (+)
G359370 NA other upstream 1020878 3225057 ~ 3231615 (+)
G359369 NA other upstream 1034964 3216944 ~ 3217529 (+)
G360234 NA other downstream 91191 4344082 ~ 4345517 (+)
G360261 NA other downstream 166850 4419741 ~ 4420069 (+)
G360287 NA other downstream 294144 4547035 ~ 4547856 (+)
G360276 sync other downstream 386125 4639016 ~ 4648000 (+)
G360985 NA other downstream 1043979 5296870 ~ 5299403 (+)

Expression


Co-expression Network