G360235


Basic Information

Item Value
gene id G360235
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 4346599 ~ 4347050 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU409256
ggctataggtctagttccattaacttcagagggttctgtgttctgttgctataggtctagttccattaacttcagagggttctgtggtctggggctataggtctagttccattaacttcagagggttctgtgttctgttgcaataggtctagttccattaacttcagagggttctgtgttctgtggtcTGGGGCTATAGGTCTAGTTCCATTAACTTCAGAGGGTTCTGTGTTCTGTTGCTATAGGTCTAGTTCCATTAACTTCAGAGGGTTCTGTGTTCTGTTGCTATAGGTCTAGTTCCATTAACTTCAGAGGGTTATGTGGTCTGGGGCTATAGGTCTAGTTCCAATAACTTCAGAGGGTTCTGTGTTCTGTTGCTATAGGTCTAGTTCCATTAACTTcagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU409256 True 406 lncRNA 0.43 2 4346599 4347050

Neighbor

gene id symbol gene type direction distance location
grin3a LOC106572512 coding upstream 711484 3547948 ~ 3635115 (+)
musk musk coding upstream 1017333 3258931 ~ 3329266 (+)
si:busm1-57f23.1 LOC106572555 coding upstream 1198009 3140042 ~ 3148590 (+)
LOC110524930 LOC106572564 coding upstream 1239360 3032849 ~ 3107239 (+)
LOC118964552 cntfr coding upstream 1329311 2655698 ~ 3017288 (+)
LOC110523122 onecut2 coding downstream 214300 4561350 ~ 4598776 (+)
LOC110523121 LOC106572199 coding downstream 307096 4654146 ~ 4670585 (+)
tcf4 tcf4 coding downstream 561409 4908459 ~ 5339341 (+)
LOC110524934 LOC106572350 coding downstream 1070418 5417468 ~ 5458865 (+)
LOC110524936 NA coding downstream 1229964 5577014 ~ 5577940 (+)
G360226 NA non-coding upstream 34404 4311658 ~ 4312195 (+)
G360218 NA non-coding upstream 51267 4294874 ~ 4295332 (+)
G360212 NA non-coding upstream 61315 4280394 ~ 4285284 (+)
G360197 NA non-coding upstream 92648 4253557 ~ 4253951 (+)
G360195 LOC101886070 non-coding upstream 93708 4252493 ~ 4252891 (+)
G360253 NA non-coding downstream 49371 4396421 ~ 4396646 (+)
G360260 NA non-coding downstream 69965 4417015 ~ 4417526 (+)
G360263 NA non-coding downstream 73811 4420861 ~ 4421107 (+)
G360271 NA non-coding downstream 91041 4438091 ~ 4438602 (+)
G360304 NA non-coding downstream 109290 4456340 ~ 4457908 (+)
G360234 NA other upstream 1082 4344082 ~ 4345517 (+)
G360121 NA other upstream 335243 4008748 ~ 4011356 (+)
G359438 NA other upstream 967280 3347509 ~ 3379319 (+)
G359371 NA other upstream 1109294 3229594 ~ 3237305 (+)
G359370 NA other upstream 1114984 3225057 ~ 3231615 (+)
G360261 NA other downstream 72691 4419741 ~ 4420069 (+)
G360287 NA other downstream 199985 4547035 ~ 4547856 (+)
G360276 sync other downstream 291966 4639016 ~ 4648000 (+)
G360985 NA other downstream 949820 5296870 ~ 5299403 (+)
G361671 NA other downstream 1456778 5803828 ~ 5927926 (+)

Expression


Co-expression Network