G360253


Basic Information

Item Value
gene id G360253
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 4396421 ~ 4396646 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU409276
GCTCCAGGAAATACTCTCAGAGACTGCTCCAGGAAATACTCTCAGAGACTGCTCCAGGAAATACTCTCAGAGACTGCTCCAGGAAATACTCTCAGAGACTACTCCAGGAAATACTCTCAGAGACTACTCCAGGAAATACTCTGAGAGAGTGCGCCAGGAAATACTCTCAGAGAGTGCTCCAGGAAATACTCTCAGAGACTGCTCCAGGAAATACAGTATCCTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU409276 True 226 lncRNA 0.47 1 4396421 4396646

Neighbor

gene id symbol gene type direction distance location
grin3a LOC106572512 coding upstream 761306 3547948 ~ 3635115 (+)
musk musk coding upstream 1067155 3258931 ~ 3329266 (+)
si:busm1-57f23.1 LOC106572555 coding upstream 1247831 3140042 ~ 3148590 (+)
LOC110524930 LOC106572564 coding upstream 1289182 3032849 ~ 3107239 (+)
LOC118964552 cntfr coding upstream 1379133 2655698 ~ 3017288 (+)
LOC110523122 onecut2 coding downstream 164704 4561350 ~ 4598776 (+)
LOC110523121 LOC106572199 coding downstream 257500 4654146 ~ 4670585 (+)
tcf4 tcf4 coding downstream 511813 4908459 ~ 5339341 (+)
LOC110524934 LOC106572350 coding downstream 1020822 5417468 ~ 5458865 (+)
LOC110524936 NA coding downstream 1180368 5577014 ~ 5577940 (+)
G360235 NA non-coding upstream 49371 4346599 ~ 4347050 (+)
G360226 NA non-coding upstream 84226 4311658 ~ 4312195 (+)
G360218 NA non-coding upstream 101089 4294874 ~ 4295332 (+)
G360212 NA non-coding upstream 111137 4280394 ~ 4285284 (+)
G360197 NA non-coding upstream 142470 4253557 ~ 4253951 (+)
G360260 NA non-coding downstream 20369 4417015 ~ 4417526 (+)
G360263 NA non-coding downstream 24215 4420861 ~ 4421107 (+)
G360271 NA non-coding downstream 41445 4438091 ~ 4438602 (+)
G360304 NA non-coding downstream 59694 4456340 ~ 4457908 (+)
G360306 NA non-coding downstream 62039 4458685 ~ 4459780 (+)
G360234 NA other upstream 50904 4344082 ~ 4345517 (+)
G360121 NA other upstream 385065 4008748 ~ 4011356 (+)
G359438 NA other upstream 1017102 3347509 ~ 3379319 (+)
G359371 NA other upstream 1159116 3229594 ~ 3237305 (+)
G359370 NA other upstream 1164806 3225057 ~ 3231615 (+)
G360261 NA other downstream 23095 4419741 ~ 4420069 (+)
G360287 NA other downstream 150389 4547035 ~ 4547856 (+)
G360276 sync other downstream 242370 4639016 ~ 4648000 (+)
G360985 NA other downstream 900224 5296870 ~ 5299403 (+)
G361671 NA other downstream 1407182 5803828 ~ 5927926 (+)

Expression


Co-expression Network