G360271


Basic Information

Item Value
gene id G360271
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 4438091 ~ 4438602 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU409294
gtgaatacaggcccagcgCCCTGCAGTAGTAAAGGAATCTGACTAGATCAGATTTACacagtgaatacaggcccagctcTCTGCAGTAGTAAAGGAATCTGACTAGATCAGATTTACacagtgaatacaggcccagcgCCCTGCAGTAGTAAAGGAATCTGACTAGATCAGATTTACacagtgaatacaggcccagctcTCTGCAGTAGTAAAGGAATCTGACTAGATCAGATTTACacagtgaatacaggcccagtgCTCTGCAGTAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU409294 True 270 lncRNA 0.46 2 4438091 4438602

Neighbor

gene id symbol gene type direction distance location
grin3a LOC106572512 coding upstream 802976 3547948 ~ 3635115 (+)
musk musk coding upstream 1108825 3258931 ~ 3329266 (+)
si:busm1-57f23.1 LOC106572555 coding upstream 1289501 3140042 ~ 3148590 (+)
LOC110524930 LOC106572564 coding upstream 1330852 3032849 ~ 3107239 (+)
LOC118964552 cntfr coding upstream 1420803 2655698 ~ 3017288 (+)
LOC110523122 onecut2 coding downstream 122748 4561350 ~ 4598776 (+)
LOC110523121 LOC106572199 coding downstream 215544 4654146 ~ 4670585 (+)
tcf4 tcf4 coding downstream 469857 4908459 ~ 5339341 (+)
LOC110524934 LOC106572350 coding downstream 978866 5417468 ~ 5458865 (+)
LOC110524936 NA coding downstream 1138412 5577014 ~ 5577940 (+)
G360263 NA non-coding upstream 16984 4420861 ~ 4421107 (+)
G360260 NA non-coding upstream 20565 4417015 ~ 4417526 (+)
G360253 NA non-coding upstream 41445 4396421 ~ 4396646 (+)
G360235 NA non-coding upstream 91041 4346599 ~ 4347050 (+)
G360226 NA non-coding upstream 125896 4311658 ~ 4312195 (+)
G360304 NA non-coding downstream 17738 4456340 ~ 4457908 (+)
G360306 NA non-coding downstream 20083 4458685 ~ 4459780 (+)
G360307 NA non-coding downstream 25879 4464481 ~ 4481184 (+)
G360286 NA non-coding downstream 66018 4504620 ~ 4508249 (+)
G360309 NA non-coding downstream 69694 4508296 ~ 4508584 (+)
G360261 NA other upstream 18022 4419741 ~ 4420069 (+)
G360234 NA other upstream 92574 4344082 ~ 4345517 (+)
G360121 NA other upstream 426735 4008748 ~ 4011356 (+)
G359438 NA other upstream 1058772 3347509 ~ 3379319 (+)
G359371 NA other upstream 1200786 3229594 ~ 3237305 (+)
G360287 NA other downstream 108433 4547035 ~ 4547856 (+)
G360276 sync other downstream 200414 4639016 ~ 4648000 (+)
G360985 NA other downstream 858268 5296870 ~ 5299403 (+)
G361671 NA other downstream 1365226 5803828 ~ 5927926 (+)
G362297 zbtb43 other downstream 2747324 7185926 ~ 7189819 (+)

Expression


Co-expression Network