G360694


Basic Information

Item Value
gene id G360694
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 4729597 ~ 4729842 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU409800
CATATACATTTGTTGTCTCTCTACTGCACCGTTCGCAAAACCCACACAAACTCAACTCAGACGCTGTATTCACAGTGACCATACAGAAACTCAGAGTTGAACTAATAATGACACACAGATTTAACACTGTACTTTTCATTGACCCCAAGACACTGTTAAGTTGGGTCTgcagtatctatgtaaagtgtTCTTCCTCATCCGTCTGTGTTTCTACTGCTTGTGTATTGATTCATGTAAATAATATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU409800 True 246 lncRNA 0.38 1 4729597 4729842

Neighbor

gene id symbol gene type direction distance location
LOC110523121 LOC106572199 coding upstream 59012 4654146 ~ 4670585 (+)
LOC110523122 onecut2 coding upstream 130821 4561350 ~ 4598776 (+)
grin3a LOC106572512 coding upstream 1094482 3547948 ~ 3635115 (+)
musk musk coding upstream 1400331 3258931 ~ 3329266 (+)
si:busm1-57f23.1 LOC106572555 coding upstream 1581007 3140042 ~ 3148590 (+)
tcf4 tcf4 coding downstream 178617 4908459 ~ 5339341 (+)
LOC110524934 LOC106572350 coding downstream 687626 5417468 ~ 5458865 (+)
LOC110524936 NA coding downstream 847172 5577014 ~ 5577940 (+)
LOC110522836 LOC105008486 coding downstream 942807 5672649 ~ 5760948 (+)
LOC110523126 LOC106572095 coding downstream 1758560 6488402 ~ 6555494 (+)
G360681 NA non-coding upstream 8772 4720614 ~ 4720825 (+)
G360680 NA non-coding upstream 9112 4720048 ~ 4720485 (+)
G360673 NA non-coding upstream 12840 4716106 ~ 4716757 (+)
G360300 NA non-coding upstream 62111 4643394 ~ 4667486 (+)
G360333 NA non-coding upstream 68110 4661064 ~ 4661487 (+)
G360696 NA non-coding downstream 3092 4732934 ~ 4733148 (+)
G360697 NA non-coding downstream 3514 4733356 ~ 4734075 (+)
G360699 NA non-coding downstream 4950 4734792 ~ 4735013 (+)
G360707 NA non-coding downstream 17149 4746991 ~ 4747469 (+)
G360718 NA non-coding downstream 31792 4761634 ~ 4761907 (+)
G360276 sync other upstream 81597 4639016 ~ 4648000 (+)
G360287 NA other upstream 181741 4547035 ~ 4547856 (+)
G360261 NA other upstream 309528 4419741 ~ 4420069 (+)
G360234 NA other upstream 384080 4344082 ~ 4345517 (+)
G360121 NA other upstream 718241 4008748 ~ 4011356 (+)
G360985 NA other downstream 567028 5296870 ~ 5299403 (+)
G361671 NA other downstream 1073986 5803828 ~ 5927926 (+)
G362297 zbtb43 other downstream 2456084 7185926 ~ 7189819 (+)
G362554 NA other downstream 2960598 7690440 ~ 7692514 (+)
G362662 NA other downstream 3189080 7918922 ~ 7919565 (+)

Expression


Co-expression Network