G360697


Basic Information

Item Value
gene id G360697
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 4733356 ~ 4734075 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU409803
ACGTAATATTTTCTCTTTTctccgtgttgttgtttttgtgtttgtttattccatgtgtaactctatgttgttgtttttgtgtttgtttattccatgtgtaactctatgttgttgtttttgtgtttgtttattccatgtgtaactctatgttgttgtttcttgtcgcactgctttgcttcattcTTGGCCTAGAGGTctctgttgtaaatgagaacttgttctgaactaccttgttaaataaagttaCACTATTGTTCTAAGTTCAatcactctcttcttcttcttttttttaaaagtgtgcgcttgggacagaggaagagcaattcttacactattgttctaaGTTCAatcactctcttcttcttcttttttttaaaagtgtgcgcttgggacagaggaagagcaattcttacactattgttctaaGTTCAATcactctcttcttcttcctcctcatcaTTCAGCTCATTACAATTAAATTGTAATACATTTTGTCATCCCCGTTCAACAACTCCATATCGCATTTAATGTGCTCCAttaacacctgtatttgggtagtttctcccattcttctctgcagattctcttaagctctgtcaggttggatggggagtgtcgctgcacagctattttcagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU409803 True 637 lncRNA 0.36 2 4733356 4734075

Neighbor

gene id symbol gene type direction distance location
LOC110523121 LOC106572199 coding upstream 62771 4654146 ~ 4670585 (+)
LOC110523122 onecut2 coding upstream 134580 4561350 ~ 4598776 (+)
grin3a LOC106572512 coding upstream 1098241 3547948 ~ 3635115 (+)
musk musk coding upstream 1404090 3258931 ~ 3329266 (+)
si:busm1-57f23.1 LOC106572555 coding upstream 1584766 3140042 ~ 3148590 (+)
tcf4 tcf4 coding downstream 174384 4908459 ~ 5339341 (+)
LOC110524934 LOC106572350 coding downstream 683393 5417468 ~ 5458865 (+)
LOC110524936 NA coding downstream 842939 5577014 ~ 5577940 (+)
LOC110522836 LOC105008486 coding downstream 938574 5672649 ~ 5760948 (+)
LOC110523126 LOC106572095 coding downstream 1754327 6488402 ~ 6555494 (+)
G360696 NA non-coding upstream 208 4732934 ~ 4733148 (+)
G360694 NA non-coding upstream 3514 4729597 ~ 4729842 (+)
G360681 NA non-coding upstream 12531 4720614 ~ 4720825 (+)
G360680 NA non-coding upstream 12871 4720048 ~ 4720485 (+)
G360673 NA non-coding upstream 16599 4716106 ~ 4716757 (+)
G360699 NA non-coding downstream 717 4734792 ~ 4735013 (+)
G360707 NA non-coding downstream 12916 4746991 ~ 4747469 (+)
G360718 NA non-coding downstream 27559 4761634 ~ 4761907 (+)
G360720 NA non-coding downstream 29246 4763321 ~ 4763928 (+)
G360722 NA non-coding downstream 38385 4772460 ~ 4772913 (+)
G360276 sync other upstream 85356 4639016 ~ 4648000 (+)
G360287 NA other upstream 185500 4547035 ~ 4547856 (+)
G360261 NA other upstream 313287 4419741 ~ 4420069 (+)
G360234 NA other upstream 387839 4344082 ~ 4345517 (+)
G360121 NA other upstream 722000 4008748 ~ 4011356 (+)
G360985 NA other downstream 562795 5296870 ~ 5299403 (+)
G361671 NA other downstream 1069753 5803828 ~ 5927926 (+)
G362297 zbtb43 other downstream 2451851 7185926 ~ 7189819 (+)
G362554 NA other downstream 2956365 7690440 ~ 7692514 (+)
G362662 NA other downstream 3184847 7918922 ~ 7919565 (+)

Expression


Co-expression Network